[(1R)-1-[(1S,4R,5R,6R,8R,10R,11R,12S,13R,16R,18S,21R)-10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docosan-8-yl]-2-hydroxy-2-methylpropyl] acetate

Details

Top
Internal ID e52cb370-6644-4b35-b9ce-ba7babbd28a8
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name [(1R)-1-[(1S,4R,5R,6R,8R,10R,11R,12S,13R,16R,18S,21R)-10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docosan-8-yl]-2-hydroxy-2-methylpropyl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C38H62O12/c1-18-15-20(29(33(5,6)45)47-19(2)40)50-38(46)28(18)34(7)13-14-37-17-36(37)12-11-24(49-30-27(43)26(42)25(41)21(16-39)48-30)32(3,4)22(36)9-10-23(37)35(34,8)31(38)44/h18,20-31,39,41-46H,9-17H2,1-8H3/t18-,20-,21-,22+,23+,24+,25+,26+,27-,28-,29-,30+,31-,34-,35-,36-,37+,38-/m1/s1
InChI Key DKNSWSKRPAEDMY-VPAJLPDZSA-N
Popularity 3 references in papers

Physical and Chemical Properties

Top
Molecular Formula C38H62O12
Molecular Weight 710.90 g/mol
Exact Mass 710.42412741 g/mol
Topological Polar Surface Area (TPSA) 196.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 2.01
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(1R)-1-[(1S,4R,5R,6R,8R,10R,11R,12S,13R,16R,18S,21R)-10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docosan-8-yl]-2-hydroxy-2-methylpropyl] acetate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6300 63.00%
Caco-2 - 0.8685 86.85%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7731 77.31%
OATP2B1 inhibitior - 0.8680 86.80%
OATP1B1 inhibitior + 0.8328 83.28%
OATP1B3 inhibitior + 0.8938 89.38%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.9001 90.01%
P-glycoprotein inhibitior + 0.7692 76.92%
P-glycoprotein substrate + 0.5139 51.39%
CYP3A4 substrate + 0.7239 72.39%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8753 87.53%
CYP3A4 inhibition - 0.9341 93.41%
CYP2C9 inhibition - 0.7569 75.69%
CYP2C19 inhibition - 0.8663 86.63%
CYP2D6 inhibition - 0.9536 95.36%
CYP1A2 inhibition - 0.8477 84.77%
CYP2C8 inhibition + 0.7120 71.20%
CYP inhibitory promiscuity - 0.9420 94.20%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7208 72.08%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9112 91.12%
Skin irritation - 0.6968 69.68%
Skin corrosion - 0.9465 94.65%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6701 67.01%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.6890 68.90%
skin sensitisation - 0.9174 91.74%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity - 0.6107 61.07%
Acute Oral Toxicity (c) III 0.3723 37.23%
Estrogen receptor binding + 0.5942 59.42%
Androgen receptor binding + 0.7300 73.00%
Thyroid receptor binding - 0.5666 56.66%
Glucocorticoid receptor binding + 0.6180 61.80%
Aromatase binding + 0.6896 68.96%
PPAR gamma + 0.6670 66.70%
Honey bee toxicity - 0.6471 64.71%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9180 91.80%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.43% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.17% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.16% 96.09%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 95.66% 98.75%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 95.63% 89.34%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.72% 97.09%
CHEMBL2996 Q05655 Protein kinase C delta 93.02% 97.79%
CHEMBL2581 P07339 Cathepsin D 92.85% 98.95%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 91.77% 96.95%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 91.41% 100.00%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 90.72% 92.86%
CHEMBL3837 P07711 Cathepsin L 90.30% 96.61%
CHEMBL226 P30542 Adenosine A1 receptor 90.27% 95.93%
CHEMBL220 P22303 Acetylcholinesterase 90.21% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.48% 97.14%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 89.31% 96.77%
CHEMBL2413 P32246 C-C chemokine receptor type 1 88.80% 89.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.61% 89.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.21% 85.14%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.76% 96.61%
CHEMBL340 P08684 Cytochrome P450 3A4 85.83% 91.19%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 85.51% 95.71%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.27% 91.24%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.21% 100.00%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 84.87% 92.88%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.81% 100.00%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 83.58% 82.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.56% 95.56%
CHEMBL5255 O00206 Toll-like receptor 4 83.49% 92.50%
CHEMBL3437 Q16853 Amine oxidase, copper containing 83.17% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.74% 86.33%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 82.49% 95.71%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.20% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.47% 92.62%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 81.39% 97.47%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.92% 93.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.41% 94.45%
CHEMBL5028 O14672 ADAM10 80.40% 97.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.38% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea simplex

Cross-Links

Top
PubChem 102600396
LOTUS LTS0166067
wikiData Q104983482