(2R,3R,4S,5S,6R)-2-[(4S,5S,6S)-5-hydroxy-6-[(3S,7S,8R,9S,10S,13R,14S,17R)-3-hydroxy-7-methoxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methylhept-2-en-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID 641ae229-39cd-4636-a8db-b30ec4887bdf
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2R,3R,4S,5S,6R)-2-[(4S,5S,6S)-5-hydroxy-6-[(3S,7S,8R,9S,10S,13R,14S,17R)-3-hydroxy-7-methoxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methylhept-2-en-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC(C1CCC2(C1(CCC3(C2C(C=C4C3CCC(C4(C)C)O)OC)C)C)C)C(C(C=C(C)C)OC5C(C(C(C(O5)CO)O)O)O)O
SMILES (Isomeric) C[C@@H]([C@H]1CC[C@@]2([C@@]1(CC[C@@]3([C@H]2[C@H](C=C4[C@H]3CC[C@@H](C4(C)C)O)OC)C)C)C)[C@@H]([C@H](C=C(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O
InChI InChI=1S/C37H62O9/c1-19(2)16-24(45-33-31(43)30(42)29(41)26(18-38)46-33)28(40)20(3)21-12-13-37(8)32-25(44-9)17-23-22(10-11-27(39)34(23,4)5)35(32,6)14-15-36(21,37)7/h16-17,20-22,24-33,38-43H,10-15,18H2,1-9H3/t20-,21+,22+,24-,25-,26+,27-,28-,29+,30-,31+,32+,33+,35-,36+,37-/m0/s1
InChI Key FHEJVLFYFWDFDA-ILUBBKPGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C37H62O9
Molecular Weight 650.90 g/mol
Exact Mass 650.43938355 g/mol
Topological Polar Surface Area (TPSA) 149.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 3.73
H-Bond Acceptor 9
H-Bond Donor 6
Rotatable Bonds 8

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R,4S,5S,6R)-2-[(4S,5S,6S)-5-hydroxy-6-[(3S,7S,8R,9S,10S,13R,14S,17R)-3-hydroxy-7-methoxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methylhept-2-en-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8480 84.80%
Caco-2 - 0.8470 84.70%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7567 75.67%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8146 81.46%
OATP1B3 inhibitior + 0.8473 84.73%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.7042 70.42%
BSEP inhibitior - 0.6254 62.54%
P-glycoprotein inhibitior + 0.7355 73.55%
P-glycoprotein substrate - 0.5125 51.25%
CYP3A4 substrate + 0.7020 70.20%
CYP2C9 substrate - 0.8037 80.37%
CYP2D6 substrate - 0.8331 83.31%
CYP3A4 inhibition - 0.8820 88.20%
CYP2C9 inhibition - 0.8058 80.58%
CYP2C19 inhibition - 0.8654 86.54%
CYP2D6 inhibition - 0.9295 92.95%
CYP1A2 inhibition - 0.8304 83.04%
CYP2C8 inhibition + 0.5714 57.14%
CYP inhibitory promiscuity - 0.9026 90.26%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6888 68.88%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9213 92.13%
Skin irritation - 0.5859 58.59%
Skin corrosion - 0.9440 94.40%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7769 77.69%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.7125 71.25%
skin sensitisation - 0.8949 89.49%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.8660 86.60%
Acute Oral Toxicity (c) III 0.4973 49.73%
Estrogen receptor binding + 0.6575 65.75%
Androgen receptor binding + 0.7425 74.25%
Thyroid receptor binding - 0.5554 55.54%
Glucocorticoid receptor binding + 0.6792 67.92%
Aromatase binding + 0.6925 69.25%
PPAR gamma + 0.6813 68.13%
Honey bee toxicity - 0.6791 67.91%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity + 0.9070 90.70%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.32% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.15% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.36% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.80% 94.45%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.07% 95.89%
CHEMBL2581 P07339 Cathepsin D 91.05% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.59% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.66% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.38% 85.14%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 83.33% 85.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.26% 100.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.82% 100.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.53% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.35% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.34% 95.56%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.31% 95.50%
CHEMBL5255 O00206 Toll-like receptor 4 82.05% 92.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.94% 99.17%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Momordica charantia

Cross-Links

Top
PubChem 162852670
LOTUS LTS0095267
wikiData Q104995213