3,4-Didehydrorhodopin

Details

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Internal ID eea3fc6b-ec33-4025-8675-4b8aeb258fc5
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Tetraterpenoids > Carotenoids > Xanthophylls
IUPAC Name (4E,6E,8E,10E,12E,14E,16E,18E,20E,22E,24E,26E)-2,6,10,14,19,23,27,31-octamethyldotriaconta-4,6,8,10,12,14,16,18,20,22,24,26,30-tridecaen-2-ol
SMILES (Canonical) CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC=C(C)C=CCC(C)(C)O)C)C)C)C
SMILES (Isomeric) CC(=CCC/C(=C/C=C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C=C(\C)/C=C/CC(C)(C)O)/C)/C)/C)C
InChI InChI=1S/C40H56O/c1-33(2)19-13-22-36(5)25-16-28-37(6)26-14-23-34(3)20-11-12-21-35(4)24-15-27-38(7)29-17-30-39(8)31-18-32-40(9,10)41/h11-12,14-21,23-31,41H,13,22,32H2,1-10H3/b12-11+,23-14+,24-15+,28-16+,29-17+,31-18+,34-20+,35-21+,36-25+,37-26+,38-27+,39-30+
InChI Key YNXUITAACINYQG-VWQKURAKSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C40H56O
Molecular Weight 552.90 g/mol
Exact Mass 552.433116406 g/mol
Topological Polar Surface Area (TPSA) 20.20 Ų
XlogP 14.20
Atomic LogP (AlogP) 11.91
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 16

Synonyms

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3,4-Dehydrorhodopin
(3E)-3,4-didehydrorhodopin
1-hydroxy-3,4-didehydro-1,2-dihydrolycopene
1-Hydroxy-3,4-didehydrolycopene/ 3,4-Dehydrorhodopin/ 3,4-Didehydrorhodopin
(3E)-3,4-dehydrorhodopin
SCHEMBL2838745
all-trans-3,4-didehydrorhodopin
1-hydroxy-3,4-didehydrolycopene
CHEBI:62481
DTXSID001346732
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 3,4-Didehydrorhodopin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9889 98.89%
Caco-2 - 0.7593 75.93%
Blood Brain Barrier + 0.9750 97.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Nucleus 0.3984 39.84%
OATP2B1 inhibitior - 0.8578 85.78%
OATP1B1 inhibitior + 0.8491 84.91%
OATP1B3 inhibitior + 0.9507 95.07%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9971 99.71%
P-glycoprotein inhibitior + 0.7980 79.80%
P-glycoprotein substrate - 0.8334 83.34%
CYP3A4 substrate + 0.5415 54.15%
CYP2C9 substrate - 0.6141 61.41%
CYP2D6 substrate - 0.7761 77.61%
CYP3A4 inhibition - 0.9023 90.23%
CYP2C9 inhibition - 0.8881 88.81%
CYP2C19 inhibition - 0.8428 84.28%
CYP2D6 inhibition - 0.9402 94.02%
CYP1A2 inhibition - 0.7752 77.52%
CYP2C8 inhibition - 0.8566 85.66%
CYP inhibitory promiscuity - 0.8194 81.94%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.5500 55.00%
Carcinogenicity (trinary) Non-required 0.6334 63.34%
Eye corrosion - 0.7598 75.98%
Eye irritation - 0.8973 89.73%
Skin irritation + 0.9193 91.93%
Skin corrosion - 0.8769 87.69%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9493 94.93%
Micronuclear - 1.0000 100.00%
Hepatotoxicity - 0.6643 66.43%
skin sensitisation + 0.9222 92.22%
Respiratory toxicity - 0.6889 68.89%
Reproductive toxicity - 0.9222 92.22%
Mitochondrial toxicity - 0.8625 86.25%
Nephrotoxicity + 0.6928 69.28%
Acute Oral Toxicity (c) III 0.9059 90.59%
Estrogen receptor binding + 0.8336 83.36%
Androgen receptor binding - 0.4830 48.30%
Thyroid receptor binding + 0.7936 79.36%
Glucocorticoid receptor binding + 0.5630 56.30%
Aromatase binding - 0.6497 64.97%
PPAR gamma + 0.7618 76.18%
Honey bee toxicity - 0.8659 86.59%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity - 0.5482 54.82%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 89.10% 92.08%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 87.65% 89.34%
CHEMBL3401 O75469 Pregnane X receptor 87.36% 94.73%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.91% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 84.54% 91.11%
CHEMBL1870 P28702 Retinoid X receptor beta 82.32% 95.00%
CHEMBL2004 P48443 Retinoid X receptor gamma 82.30% 100.00%
CHEMBL2581 P07339 Cathepsin D 82.00% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.59% 99.17%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.58% 96.95%
CHEMBL2061 P19793 Retinoid X receptor alpha 81.47% 91.67%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 80.99% 96.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 16061249
LOTUS LTS0203133
wikiData Q27131946