3-[(3S,5R,8R,9S,10S,11R,13R,14S,17R)-3-[(2R,3R,4S,5R,6S)-5-[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-11,14-dihydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

Details

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Internal ID 72ac7692-e2ce-43ed-adea-d8dc1cc09758
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Cardenolides and derivatives > Cardenolide glycosides and derivatives
IUPAC Name 3-[(3S,5R,8R,9S,10S,11R,13R,14S,17R)-3-[(2R,3R,4S,5R,6S)-5-[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-11,14-dihydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2)CCC4C3C(CC5(C4(CCC5C6=CC(=O)OC6)O)C)O)C)O)O)OC7C(C(CO7)(CO)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@H]2CC[C@]3([C@@H](C2)CC[C@@H]4[C@@H]3[C@@H](C[C@]5([C@@]4(CC[C@@H]5C6=CC(=O)OC6)O)C)O)C)O)O)O[C@H]7[C@@H]([C@](CO7)(CO)O)O
InChI InChI=1S/C34H52O13/c1-16-27(47-30-28(40)33(41,14-35)15-44-30)25(38)26(39)29(45-16)46-19-6-8-31(2)18(11-19)4-5-21-24(31)22(36)12-32(3)20(7-9-34(21,32)42)17-10-23(37)43-13-17/h10,16,18-22,24-30,35-36,38-42H,4-9,11-15H2,1-3H3/t16-,18+,19-,20+,21+,22+,24+,25-,26+,27-,28-,29-,30-,31-,32+,33+,34-/m0/s1
InChI Key KIQMPXRVKKVROQ-AXMZTVKISA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C34H52O13
Molecular Weight 668.80 g/mol
Exact Mass 668.34079171 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -0.11
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(3S,5R,8R,9S,10S,11R,13R,14S,17R)-3-[(2R,3R,4S,5R,6S)-5-[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-11,14-dihydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8285 82.85%
Caco-2 - 0.8815 88.15%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.8184 81.84%
OATP2B1 inhibitior - 0.6097 60.97%
OATP1B1 inhibitior + 0.9188 91.88%
OATP1B3 inhibitior + 0.9329 93.29%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.5789 57.89%
P-glycoprotein inhibitior + 0.6676 66.76%
P-glycoprotein substrate + 0.7126 71.26%
CYP3A4 substrate + 0.7352 73.52%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9010 90.10%
CYP3A4 inhibition - 0.9194 91.94%
CYP2C9 inhibition - 0.9182 91.82%
CYP2C19 inhibition - 0.9284 92.84%
CYP2D6 inhibition - 0.9380 93.80%
CYP1A2 inhibition - 0.9197 91.97%
CYP2C8 inhibition + 0.4750 47.50%
CYP inhibitory promiscuity - 0.9237 92.37%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5893 58.93%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.9261 92.61%
Skin irritation - 0.5142 51.42%
Skin corrosion - 0.9440 94.40%
Ames mutagenesis - 0.6470 64.70%
Human Ether-a-go-go-Related Gene inhibition + 0.8161 81.61%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6092 60.92%
skin sensitisation - 0.9231 92.31%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.5579 55.79%
Acute Oral Toxicity (c) I 0.8499 84.99%
Estrogen receptor binding + 0.7896 78.96%
Androgen receptor binding + 0.8059 80.59%
Thyroid receptor binding - 0.6489 64.89%
Glucocorticoid receptor binding + 0.5715 57.15%
Aromatase binding + 0.6685 66.85%
PPAR gamma + 0.6560 65.60%
Honey bee toxicity - 0.6487 64.87%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9475 94.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.62% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.64% 95.93%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 97.45% 96.77%
CHEMBL1994 P08235 Mineralocorticoid receptor 97.12% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.88% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.70% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.43% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.04% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.89% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.92% 92.94%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.88% 97.36%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 90.97% 82.69%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.93% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.41% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.71% 94.00%
CHEMBL3038469 P24941 CDK2/Cyclin A 87.24% 91.38%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.74% 95.89%
CHEMBL2581 P07339 Cathepsin D 86.31% 98.95%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 86.15% 81.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.78% 96.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.57% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.55% 85.14%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.53% 94.33%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.83% 96.38%
CHEMBL4530 P00488 Coagulation factor XIII 83.03% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ornithogalum nutans

Cross-Links

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PubChem 162932075
LOTUS LTS0137249
wikiData Q105141641