[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] (2R,4aS,6aR,6aS,6bR,8aR,9R,10S,12aR,14bS)-9-(hydroxymethyl)-2,6a,6b,9,12a-pentamethyl-1-methylidene-10-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate

Details

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Internal ID bd2e358a-6b53-4c8c-b186-bc481b0b847c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] (2R,4aS,6aR,6aS,6bR,8aR,9R,10S,12aR,14bS)-9-(hydroxymethyl)-2,6a,6b,9,12a-pentamethyl-1-methylidene-10-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical) CC1CCC2(CCC3(C(=CCC4C3(CCC5C4(CCC(C5(C)CO)OC6C(C(C(CO6)O)O)O)C)C)C2C1=C)C)C(=O)OC7C(C(C(C(O7)CO)O)O)O
SMILES (Isomeric) C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H]([C@@]5(C)CO)O[C@H]6[C@@H]([C@H]([C@H](CO6)O)O)O)C)C)[C@@H]2C1=C)C)C(=O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O
InChI InChI=1S/C41H64O13/c1-20-9-14-41(36(50)54-35-33(49)31(47)30(46)24(17-42)52-35)16-15-39(5)22(28(41)21(20)2)7-8-26-37(3)12-11-27(53-34-32(48)29(45)23(44)18-51-34)38(4,19-43)25(37)10-13-40(26,39)6/h7,20,23-35,42-49H,2,8-19H2,1,3-6H3/t20-,23+,24-,25-,26-,27+,28+,29+,30-,31+,32-,33-,34+,35+,37+,38+,39-,40-,41+/m1/s1
InChI Key LJCUOMZSVKPSBW-PAUAZMGASA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C41H64O13
Molecular Weight 764.90 g/mol
Exact Mass 764.43469209 g/mol
Topological Polar Surface Area (TPSA) 216.00 Ų
XlogP 2.20
Atomic LogP (AlogP) 1.70
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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356785-73-4
Ursa-12,19(29)-dien-28-oic acid, 3-(alpha-L-arabinopyranosyloxy)-23-hydroxy-, beta-D-glucopyranosyl ester, (3beta,4alpha)-

2D Structure

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2D Structure of [(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl] (2R,4aS,6aR,6aS,6bR,8aR,9R,10S,12aR,14bS)-9-(hydroxymethyl)-2,6a,6b,9,12a-pentamethyl-1-methylidene-10-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7135 71.35%
Caco-2 - 0.8806 88.06%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7934 79.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8319 83.19%
OATP1B3 inhibitior - 0.3786 37.86%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6776 67.76%
BSEP inhibitior - 0.4572 45.72%
P-glycoprotein inhibitior + 0.7376 73.76%
P-glycoprotein substrate - 0.5740 57.40%
CYP3A4 substrate + 0.7368 73.68%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8587 85.87%
CYP3A4 inhibition - 0.8913 89.13%
CYP2C9 inhibition - 0.9110 91.10%
CYP2C19 inhibition - 0.8993 89.93%
CYP2D6 inhibition - 0.9474 94.74%
CYP1A2 inhibition - 0.8888 88.88%
CYP2C8 inhibition + 0.7271 72.71%
CYP inhibitory promiscuity - 0.9715 97.15%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6497 64.97%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9118 91.18%
Skin irritation - 0.5327 53.27%
Skin corrosion - 0.9440 94.40%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7497 74.97%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9024 90.24%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity - 0.6125 61.25%
Nephrotoxicity - 0.7791 77.91%
Acute Oral Toxicity (c) III 0.7014 70.14%
Estrogen receptor binding + 0.7361 73.61%
Androgen receptor binding + 0.7464 74.64%
Thyroid receptor binding - 0.5686 56.86%
Glucocorticoid receptor binding + 0.6452 64.52%
Aromatase binding + 0.6178 61.78%
PPAR gamma + 0.7081 70.81%
Honey bee toxicity - 0.7080 70.80%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6750 67.50%
Fish aquatic toxicity + 0.9590 95.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.73% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.38% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.58% 97.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 87.46% 97.36%
CHEMBL2581 P07339 Cathepsin D 87.28% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.55% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.98% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.77% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.77% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.52% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.48% 95.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.43% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.39% 92.94%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.04% 91.07%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.58% 91.24%
CHEMBL5028 O14672 ADAM10 81.41% 97.50%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.95% 86.92%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.74% 94.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.28% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Sanguisorba officinalis

Cross-Links

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PubChem 11104682
LOTUS LTS0145092
wikiData Q105152501