2-(Hydroxymethyl)-6-[4-[3-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]penta-1,4-dienyl]phenoxy]oxane-3,4,5-triol

Details

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Internal ID dc618ca2-14d3-4b22-bfc4-bcdc228c627d
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name 2-(hydroxymethyl)-6-[4-[3-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]penta-1,4-dienyl]phenoxy]oxane-3,4,5-triol
SMILES (Canonical) C=CC(C=CC1=CC=C(C=C1)OC2C(C(C(C(O2)CO)O)O)O)C3=CC=C(C=C3)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) C=CC(C=CC1=CC=C(C=C1)OC2C(C(C(C(O2)CO)O)O)O)C3=CC=C(C=C3)OC4C(C(C(C(O4)CO)O)O)O
InChI InChI=1S/C29H36O12/c1-2-16(17-7-11-19(12-8-17)39-29-27(37)25(35)23(33)21(14-31)41-29)6-3-15-4-9-18(10-5-15)38-28-26(36)24(34)22(32)20(13-30)40-28/h2-12,16,20-37H,1,13-14H2
InChI Key AROSPRRPXMWTNY-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C29H36O12
Molecular Weight 576.60 g/mol
Exact Mass 576.22067658 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP 0.80
Atomic LogP (AlogP) -0.97
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-(Hydroxymethyl)-6-[4-[3-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]penta-1,4-dienyl]phenoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8774 87.74%
Caco-2 - 0.8901 89.01%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6031 60.31%
OATP2B1 inhibitior - 0.5669 56.69%
OATP1B1 inhibitior + 0.9253 92.53%
OATP1B3 inhibitior + 0.9654 96.54%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.7612 76.12%
P-glycoprotein inhibitior + 0.5751 57.51%
P-glycoprotein substrate - 0.9301 93.01%
CYP3A4 substrate - 0.5000 50.00%
CYP2C9 substrate + 0.5811 58.11%
CYP2D6 substrate - 0.8238 82.38%
CYP3A4 inhibition - 0.8119 81.19%
CYP2C9 inhibition - 0.9063 90.63%
CYP2C19 inhibition - 0.8498 84.98%
CYP2D6 inhibition - 0.8980 89.80%
CYP1A2 inhibition - 0.9402 94.02%
CYP2C8 inhibition - 0.7066 70.66%
CYP inhibitory promiscuity - 0.7158 71.58%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6144 61.44%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9030 90.30%
Skin irritation - 0.8464 84.64%
Skin corrosion - 0.9585 95.85%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7556 75.56%
Micronuclear - 0.5641 56.41%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.8024 80.24%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity - 0.5222 52.22%
Mitochondrial toxicity - 0.7750 77.50%
Nephrotoxicity - 0.7802 78.02%
Acute Oral Toxicity (c) III 0.5744 57.44%
Estrogen receptor binding + 0.7447 74.47%
Androgen receptor binding + 0.5975 59.75%
Thyroid receptor binding + 0.6022 60.22%
Glucocorticoid receptor binding - 0.5070 50.70%
Aromatase binding + 0.5824 58.24%
PPAR gamma + 0.7500 75.00%
Honey bee toxicity - 0.6036 60.36%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8777 87.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.27% 91.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 95.33% 96.00%
CHEMBL226 P30542 Adenosine A1 receptor 93.33% 95.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.39% 99.17%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.20% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.45% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 86.65% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.39% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.24% 86.92%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 83.92% 89.67%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.84% 86.33%
CHEMBL1951 P21397 Monoamine oxidase A 83.63% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.66% 94.45%
CHEMBL4208 P20618 Proteasome component C5 82.37% 90.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 80.36% 92.32%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypoxis nyasica
Hypoxis obtusa

Cross-Links

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PubChem 353841
LOTUS LTS0208420
wikiData Q104917464