3'-Hydroxy-beta-rubromycin

Details

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Internal ID d78afbe8-0d28-449e-ba34-7077a8d50600
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Pyranochromenes
IUPAC Name methyl 3',8',10-trihydroxy-5',7'-dimethoxy-4',9,9'-trioxospiro[3,4-dihydropyrano[4,3-g]chromene-2,2'-3H-benzo[f][1]benzofuran]-7-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H20O13/c1-35-11-8-12(36-2)18(28)16-15(11)19(29)17-23(21(16)31)40-27(24(17)32)5-4-9-6-10-7-13(25(33)37-3)38-26(34)14(10)20(30)22(9)39-27/h6-8,24,28,30,32H,4-5H2,1-3H3
InChI Key ALEFWKBEHYAYBG-UHFFFAOYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C27H20O13
Molecular Weight 552.40 g/mol
Exact Mass 552.09039069 g/mol
Topological Polar Surface Area (TPSA) 184.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 1.75
H-Bond Acceptor 13
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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3'-Hydroxy-.beta.-rubromycin
methyl 3',8',10-trihydroxy-5',7'-dimethoxy-4',9,9'-trioxo-spiro[3,4-dihydropyrano[4,3-g]chromene-2,2'-3H-benzo[f]benzofuran]-7-carboxylate

2D Structure

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2D Structure of 3'-Hydroxy-beta-rubromycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9270 92.70%
Caco-2 - 0.7861 78.61%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.8235 82.35%
OATP2B1 inhibitior - 0.7164 71.64%
OATP1B1 inhibitior + 0.8322 83.22%
OATP1B3 inhibitior + 0.8699 86.99%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7321 73.21%
BSEP inhibitior + 0.9087 90.87%
P-glycoprotein inhibitior + 0.7274 72.74%
P-glycoprotein substrate + 0.6141 61.41%
CYP3A4 substrate + 0.6922 69.22%
CYP2C9 substrate + 0.6074 60.74%
CYP2D6 substrate - 0.8522 85.22%
CYP3A4 inhibition - 0.7726 77.26%
CYP2C9 inhibition - 0.5823 58.23%
CYP2C19 inhibition - 0.5769 57.69%
CYP2D6 inhibition - 0.8180 81.80%
CYP1A2 inhibition + 0.5126 51.26%
CYP2C8 inhibition + 0.6945 69.45%
CYP inhibitory promiscuity - 0.5940 59.40%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Danger 0.6603 66.03%
Eye corrosion - 0.9869 98.69%
Eye irritation - 0.8886 88.86%
Skin irritation - 0.7365 73.65%
Skin corrosion - 0.9307 93.07%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear + 0.6259 62.59%
Hepatotoxicity + 0.5177 51.77%
skin sensitisation - 0.8163 81.63%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity - 0.8786 87.86%
Acute Oral Toxicity (c) I 0.5507 55.07%
Estrogen receptor binding + 0.8343 83.43%
Androgen receptor binding + 0.7448 74.48%
Thyroid receptor binding - 0.5058 50.58%
Glucocorticoid receptor binding + 0.8940 89.40%
Aromatase binding + 0.7043 70.43%
PPAR gamma + 0.7163 71.63%
Honey bee toxicity - 0.7376 73.76%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9646 96.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.31% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.06% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.32% 94.00%
CHEMBL2581 P07339 Cathepsin D 95.14% 98.95%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 94.71% 96.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.47% 95.89%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 88.92% 93.03%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 87.88% 94.42%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.34% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.22% 99.23%
CHEMBL340 P08684 Cytochrome P450 3A4 86.80% 91.19%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 86.69% 90.71%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.49% 96.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.27% 92.62%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.70% 86.33%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 83.78% 80.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.25% 91.07%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.02% 85.14%
CHEMBL2535 P11166 Glucose transporter 82.98% 98.75%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.86% 95.89%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 82.21% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.13% 99.17%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 80.95% 96.67%
CHEMBL3401 O75469 Pregnane X receptor 80.89% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 5481757
LOTUS LTS0104031
wikiData Q75065109