(2S,4R)-4-(Hydroxymethyl)pyrrolidine-2-carboxylic acid

Details

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Internal ID 1f0e8fba-79fb-4544-943c-16fa597017ad
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Proline and derivatives
IUPAC Name (2S,4R)-4-(hydroxymethyl)pyrrolidine-2-carboxylic acid
SMILES (Canonical) C1C(CNC1C(=O)O)CO
SMILES (Isomeric) C1[C@H](CN[C@@H]1C(=O)O)CO
InChI InChI=1S/C6H11NO3/c8-3-4-1-5(6(9)10)7-2-4/h4-5,7-8H,1-3H2,(H,9,10)/t4-,5+/m1/s1
InChI Key CISMGNUPDUKNQK-UHNVWZDZSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C6H11NO3
Molecular Weight 145.16 g/mol
Exact Mass 145.07389321 g/mol
Topological Polar Surface Area (TPSA) 69.60 Ų
XlogP -3.20
Atomic LogP (AlogP) -0.96
H-Bond Acceptor 3
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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(2S,4R)-4-(Hydroxymethyl)pyrrolidine-2-carboxylic acid
SCHEMBL1512874
trans-4-Hydroxymethyl-L-prolin
AKOS006279908
(2S,4R)-4-(Hydroxymethyl)pyrrolidine-2-carboxylicacid

2D Structure

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2D Structure of (2S,4R)-4-(Hydroxymethyl)pyrrolidine-2-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9146 91.46%
Caco-2 - 0.9185 91.85%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.5857 58.57%
Subcellular localzation Lysosomes 0.5225 52.25%
OATP2B1 inhibitior - 0.8420 84.20%
OATP1B1 inhibitior + 0.9516 95.16%
OATP1B3 inhibitior + 0.9373 93.73%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.9689 96.89%
P-glycoprotein inhibitior - 0.9915 99.15%
P-glycoprotein substrate - 0.9279 92.79%
CYP3A4 substrate - 0.6668 66.68%
CYP2C9 substrate - 0.6141 61.41%
CYP2D6 substrate - 0.7522 75.22%
CYP3A4 inhibition - 0.9924 99.24%
CYP2C9 inhibition - 0.9375 93.75%
CYP2C19 inhibition - 0.9454 94.54%
CYP2D6 inhibition - 0.9414 94.14%
CYP1A2 inhibition - 0.8101 81.01%
CYP2C8 inhibition - 0.9607 96.07%
CYP inhibitory promiscuity - 0.9824 98.24%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7178 71.78%
Eye corrosion - 0.9243 92.43%
Eye irritation + 0.8885 88.85%
Skin irritation - 0.7215 72.15%
Skin corrosion - 0.8532 85.32%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7780 77.80%
Micronuclear - 0.5126 51.26%
Hepatotoxicity - 0.5160 51.60%
skin sensitisation - 0.9147 91.47%
Respiratory toxicity - 0.6667 66.67%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.6142 61.42%
Estrogen receptor binding - 0.8742 87.42%
Androgen receptor binding - 0.8705 87.05%
Thyroid receptor binding - 0.8670 86.70%
Glucocorticoid receptor binding - 0.7724 77.24%
Aromatase binding - 0.8413 84.13%
PPAR gamma - 0.8472 84.72%
Honey bee toxicity - 0.9042 90.42%
Biodegradation + 0.7250 72.50%
Crustacea aquatic toxicity - 0.9000 90.00%
Fish aquatic toxicity - 0.9151 91.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.25% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.60% 97.09%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 91.32% 96.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.72% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.99% 94.45%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.79% 97.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Afzelia bella

Cross-Links

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PubChem 45084646
LOTUS LTS0093509
wikiData Q104960197