(2S,3R,4R,5S)-3,4,5-Trihydroxypiperidine-2-carboxylic acid

Details

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Internal ID bd100ddb-dfb2-4e19-9436-95a971397834
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Alpha amino acids > L-alpha-amino acids
IUPAC Name (2S,3R,4R,5S)-3,4,5-trihydroxypiperidine-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C6H11NO5/c8-2-1-7-3(6(11)12)5(10)4(2)9/h2-5,7-10H,1H2,(H,11,12)/t2-,3-,4+,5+/m0/s1
InChI Key ZHFMVVUVCALAMY-QMKXCQHVSA-N
Popularity 6 references in papers

Physical and Chemical Properties

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Molecular Formula C6H11NO5
Molecular Weight 177.16 g/mol
Exact Mass 177.06372245 g/mol
Topological Polar Surface Area (TPSA) 110.00 Ų
XlogP -4.40
Atomic LogP (AlogP) -2.87
H-Bond Acceptor 5
H-Bond Donor 5
Rotatable Bonds 1

Synonyms

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96861-04-0
CHEMBL442895
(2S,3R,4R,5S)-3,4,5-trihydroxypipecolic acid
(2S,3R,4R,5S)-3,4,5-Trihydroxy-2-piperidinecarboxylic Acid
(2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid
starbld0006123
SCHEMBL942167
DTXSID00431138
BDBM50511225
2,6-dideoxy-2,6-imino-l-gulonic acid
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (2S,3R,4R,5S)-3,4,5-Trihydroxypiperidine-2-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6714 67.14%
Caco-2 - 0.9786 97.86%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability + 0.6429 64.29%
Subcellular localzation Mitochondria 0.5425 54.25%
OATP2B1 inhibitior - 0.8515 85.15%
OATP1B1 inhibitior + 0.9739 97.39%
OATP1B3 inhibitior + 0.9369 93.69%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9897 98.97%
P-glycoprotein inhibitior - 0.9848 98.48%
P-glycoprotein substrate - 0.9564 95.64%
CYP3A4 substrate - 0.6931 69.31%
CYP2C9 substrate - 0.8042 80.42%
CYP2D6 substrate - 0.7532 75.32%
CYP3A4 inhibition - 0.9952 99.52%
CYP2C9 inhibition - 0.9746 97.46%
CYP2C19 inhibition - 0.9738 97.38%
CYP2D6 inhibition - 0.9557 95.57%
CYP1A2 inhibition - 0.9453 94.53%
CYP2C8 inhibition - 0.9827 98.27%
CYP inhibitory promiscuity - 0.9971 99.71%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.7376 73.76%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.8139 81.39%
Skin irritation - 0.7473 74.73%
Skin corrosion - 0.9102 91.02%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7938 79.38%
Micronuclear + 0.5800 58.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.8748 87.48%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.7343 73.43%
Acute Oral Toxicity (c) III 0.5969 59.69%
Estrogen receptor binding - 0.9000 90.00%
Androgen receptor binding - 0.8881 88.81%
Thyroid receptor binding - 0.7199 71.99%
Glucocorticoid receptor binding - 0.6210 62.10%
Aromatase binding - 0.9056 90.56%
PPAR gamma - 0.8554 85.54%
Honey bee toxicity - 0.8942 89.42%
Biodegradation + 0.6000 60.00%
Crustacea aquatic toxicity - 0.8100 81.00%
Fish aquatic toxicity - 0.9866 98.66%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.12% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.76% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.20% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 81.59% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.20% 94.45%
CHEMBL340 P08684 Cytochrome P450 3A4 80.03% 91.19%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 9815382
LOTUS LTS0112226
wikiData Q82244949