[(2R,3S,5R)-3-hydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methyl phosphono hydrogen phosphate

Details

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Internal ID 545df3d2-d9aa-4b5e-9775-d1bbee7e61ea
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleotides > Purine deoxyribonucleotides > Purine deoxyribonucleoside diphosphates > Purine 2-deoxyribonucleoside diphosphates
IUPAC Name [(2R,3S,5R)-3-hydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methyl phosphono hydrogen phosphate
SMILES (Canonical) C1C(C(OC1N2C=NC3=C2NC=NC3=O)COP(=O)(O)OP(=O)(O)O)O
SMILES (Isomeric) C1[C@@H]([C@H](O[C@H]1N2C=NC3=C2NC=NC3=O)COP(=O)(O)OP(=O)(O)O)O
InChI InChI=1S/C10H14N4O10P2/c15-5-1-7(14-4-13-8-9(14)11-3-12-10(8)16)23-6(5)2-22-26(20,21)24-25(17,18)19/h3-7,15H,1-2H2,(H,20,21)(H,11,12,16)(H2,17,18,19)/t5-,6+,7+/m0/s1
InChI Key BKUSIKGSPSFQAC-RRKCRQDMSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C10H14N4O10P2
Molecular Weight 412.19 g/mol
Exact Mass 412.01851665 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP -4.50
Atomic LogP (AlogP) -1.01
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2R,3S,5R)-3-hydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methyl phosphono hydrogen phosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8177 81.77%
Caco-2 - 0.9109 91.09%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.4227 42.27%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9284 92.84%
OATP1B3 inhibitior + 0.9390 93.90%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9197 91.97%
P-glycoprotein inhibitior - 0.7033 70.33%
P-glycoprotein substrate - 0.7642 76.42%
CYP3A4 substrate + 0.5882 58.82%
CYP2C9 substrate - 0.7887 78.87%
CYP2D6 substrate - 0.8541 85.41%
CYP3A4 inhibition - 0.8963 89.63%
CYP2C9 inhibition - 0.9132 91.32%
CYP2C19 inhibition - 0.9149 91.49%
CYP2D6 inhibition - 0.8958 89.58%
CYP1A2 inhibition - 0.8584 85.84%
CYP2C8 inhibition - 0.7060 70.60%
CYP inhibitory promiscuity - 0.9253 92.53%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5658 56.58%
Eye corrosion - 0.9853 98.53%
Eye irritation - 0.9801 98.01%
Skin irritation - 0.7729 77.29%
Skin corrosion - 0.9292 92.92%
Ames mutagenesis + 0.5309 53.09%
Human Ether-a-go-go-Related Gene inhibition - 0.6617 66.17%
Micronuclear + 0.9800 98.00%
Hepatotoxicity + 0.6390 63.90%
skin sensitisation - 0.8561 85.61%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.7514 75.14%
Acute Oral Toxicity (c) III 0.6424 64.24%
Estrogen receptor binding + 0.7496 74.96%
Androgen receptor binding + 0.7179 71.79%
Thyroid receptor binding + 0.7075 70.75%
Glucocorticoid receptor binding + 0.5812 58.12%
Aromatase binding + 0.7733 77.33%
PPAR gamma + 0.6635 66.35%
Honey bee toxicity - 0.6839 68.39%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.7187 71.87%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.11% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 97.83% 83.82%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 96.63% 80.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.25% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.69% 97.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.81% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 89.36% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.02% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.94% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.53% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 88.43% 95.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.51% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 83.95% 91.11%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.23% 95.89%
CHEMBL2581 P07339 Cathepsin D 82.76% 98.95%
CHEMBL3384 Q16512 Protein kinase N1 82.28% 80.71%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.67% 86.92%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.34% 93.04%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 81.09% 81.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.80% 85.14%
CHEMBL4208 P20618 Proteasome component C5 80.16% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 439488
LOTUS LTS0160971
wikiData Q27103915