(2R,3S,4S,5R)-2,5-bis(hydroxymethyl)-2-pentoxyoxolane-3,4-diol

Details

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Internal ID 777c62d0-5c9c-435d-ad74-f072f285b563
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > C-glycosyl compounds
IUPAC Name (2R,3S,4S,5R)-2,5-bis(hydroxymethyl)-2-pentoxyoxolane-3,4-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C11H22O6/c1-2-3-4-5-16-11(7-13)10(15)9(14)8(6-12)17-11/h8-10,12-15H,2-7H2,1H3/t8-,9-,10+,11-/m1/s1
InChI Key SNGWVXBFQQWMDJ-CHWFTXMASA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C11H22O6
Molecular Weight 250.29 g/mol
Exact Mass 250.14163842 g/mol
Topological Polar Surface Area (TPSA) 99.40 Ų
XlogP 0.00
Atomic LogP (AlogP) -1.01
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R)-2,5-bis(hydroxymethyl)-2-pentoxyoxolane-3,4-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6501 65.01%
Caco-2 - 0.7235 72.35%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.6753 67.53%
OATP2B1 inhibitior - 0.8525 85.25%
OATP1B1 inhibitior + 0.8472 84.72%
OATP1B3 inhibitior + 0.9485 94.85%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior - 0.9143 91.43%
P-glycoprotein inhibitior - 0.9621 96.21%
P-glycoprotein substrate - 0.8525 85.25%
CYP3A4 substrate + 0.5000 50.00%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8329 83.29%
CYP3A4 inhibition - 0.8463 84.63%
CYP2C9 inhibition - 0.8111 81.11%
CYP2C19 inhibition - 0.7715 77.15%
CYP2D6 inhibition - 0.9276 92.76%
CYP1A2 inhibition - 0.8015 80.15%
CYP2C8 inhibition - 0.7854 78.54%
CYP inhibitory promiscuity - 0.8860 88.60%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6799 67.99%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9713 97.13%
Skin irritation - 0.7122 71.22%
Skin corrosion - 0.9481 94.81%
Ames mutagenesis - 0.7854 78.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6029 60.29%
Micronuclear - 0.9300 93.00%
Hepatotoxicity - 0.7692 76.92%
skin sensitisation - 0.9149 91.49%
Respiratory toxicity - 0.6333 63.33%
Reproductive toxicity - 0.8889 88.89%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity + 0.5589 55.89%
Acute Oral Toxicity (c) III 0.4630 46.30%
Estrogen receptor binding - 0.7366 73.66%
Androgen receptor binding - 0.6554 65.54%
Thyroid receptor binding - 0.5201 52.01%
Glucocorticoid receptor binding - 0.5857 58.57%
Aromatase binding - 0.7810 78.10%
PPAR gamma - 0.6620 66.20%
Honey bee toxicity - 0.9397 93.97%
Biodegradation - 0.5000 50.00%
Crustacea aquatic toxicity - 0.5664 56.64%
Fish aquatic toxicity + 0.7844 78.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.16% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.92% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.16% 91.11%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 91.15% 92.08%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.90% 99.17%
CHEMBL2581 P07339 Cathepsin D 90.32% 98.95%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 87.51% 97.29%
CHEMBL226 P30542 Adenosine A1 receptor 86.76% 95.93%
CHEMBL2996 Q05655 Protein kinase C delta 86.16% 97.79%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 84.27% 92.86%
CHEMBL299 P17252 Protein kinase C alpha 83.04% 98.03%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.99% 96.61%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.73% 95.50%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 80.83% 80.33%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 80.79% 92.32%
CHEMBL4462 Q8IXJ6 NAD-dependent deacetylase sirtuin 2 80.54% 90.24%
CHEMBL3401 O75469 Pregnane X receptor 80.15% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Brachystemma calycinum

Cross-Links

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PubChem 102443008
LOTUS LTS0137461
wikiData Q105256428