(2R)-2,5,7,8-Tetramethyl-2-(4,8,12-trimethyltridecyl)-3,4-dihydrochromen-6-ol

Details

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Internal ID 3b1cc39e-5dc3-4eb0-ab5c-06523cc7b4c4
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Quinone and hydroquinone lipids > Vitamin E compounds > Tocopherols
IUPAC Name (2R)-2,5,7,8-tetramethyl-2-(4,8,12-trimethyltridecyl)-3,4-dihydrochromen-6-ol
SMILES (Canonical) CC1=C(C2=C(CCC(O2)(C)CCCC(C)CCCC(C)CCCC(C)C)C(=C1O)C)C
SMILES (Isomeric) CC1=C(C2=C(CC[C@@](O2)(C)CCCC(C)CCCC(C)CCCC(C)C)C(=C1O)C)C
InChI InChI=1S/C29H50O2/c1-20(2)12-9-13-21(3)14-10-15-22(4)16-11-18-29(8)19-17-26-25(7)27(30)23(5)24(6)28(26)31-29/h20-22,30H,9-19H2,1-8H3/t21?,22?,29-/m1/s1
InChI Key GVJHHUAWPYXKBD-UQIPPQJZSA-N
Popularity 30,417 references in papers

Physical and Chemical Properties

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Molecular Formula C29H50O2
Molecular Weight 430.70 g/mol
Exact Mass 430.381080833 g/mol
Topological Polar Surface Area (TPSA) 29.50 Ų
XlogP 10.70
Atomic LogP (AlogP) 8.84
H-Bond Acceptor 2
H-Bond Donor 1
Rotatable Bonds 12

Synonyms

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(2R)-2,5,7,8-Tetramethyl-2-(4,8,12-trimethyltridecyl)-3,4-dihydrochromen-6-ol
(+)-alpha-Tocopherol; D-alpha-Tocopherol
rel-(+)-alpha-Tocopherol; rel-D-alpha-Tocopherol
SCHEMBL8408151
HMS3371A04

2D Structure

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2D Structure of (2R)-2,5,7,8-Tetramethyl-2-(4,8,12-trimethyltridecyl)-3,4-dihydrochromen-6-ol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9915 99.15%
Caco-2 + 0.6038 60.38%
Blood Brain Barrier + 0.9500 95.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.7187 71.87%
OATP2B1 inhibitior - 0.8561 85.61%
OATP1B1 inhibitior + 0.9414 94.14%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6681 66.81%
P-glycoprotein inhibitior - 0.9166 91.66%
P-glycoprotein substrate - 0.6439 64.39%
CYP3A4 substrate + 0.6131 61.31%
CYP2C9 substrate - 0.5955 59.55%
CYP2D6 substrate + 0.5342 53.42%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.8122 81.22%
CYP2C8 inhibition - 0.6519 65.19%
CYP inhibitory promiscuity - 0.7762 77.62%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.7474 74.74%
Eye corrosion - 0.9814 98.14%
Eye irritation - 0.8527 85.27%
Skin irritation - 0.7350 73.50%
Skin corrosion - 0.9249 92.49%
Ames mutagenesis - 0.9600 96.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6483 64.83%
Micronuclear - 0.9700 97.00%
Hepatotoxicity - 0.8101 81.01%
skin sensitisation - 0.7470 74.70%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.9150 91.50%
Acute Oral Toxicity (c) III 0.7164 71.64%
Estrogen receptor binding + 0.7220 72.20%
Androgen receptor binding + 0.7323 73.23%
Thyroid receptor binding + 0.6468 64.68%
Glucocorticoid receptor binding + 0.6333 63.33%
Aromatase binding + 0.6853 68.53%
PPAR gamma + 0.6346 63.46%
Honey bee toxicity - 0.9466 94.66%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9671 96.71%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL3902 P09211 Glutathione S-transferase Pi 500 nM
IC50
via Super-PRED
CHEMBL1293235 P02545 Prelamin-A/C 112.2 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.47% 91.11%
CHEMBL4835 P00338 L-lactate dehydrogenase A chain 90.41% 95.34%
CHEMBL2581 P07339 Cathepsin D 89.84% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.69% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.05% 96.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 87.41% 90.71%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 85.52% 89.05%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.71% 93.56%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.80% 95.56%
CHEMBL2996 Q05655 Protein kinase C delta 82.51% 97.79%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 81.42% 91.79%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Capsicum annuum
Jacobaea alpina subsp. samnitum
Silybum marianum

Cross-Links

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PubChem 12359166
LOTUS LTS0118303
wikiData Q104251574