(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1R,4S,10S,11S,13R)-11,13,15-trihydroxy-5,5,9-trimethyl-14-methylidene-6-tetracyclo[11.2.1.01,10.04,9]hexadecanyl]oxy]oxane-3,4,5-triol

Details

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Internal ID ac598ee0-ac02-4a30-b50c-102e34fa17c5
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Diterpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1R,4S,10S,11S,13R)-11,13,15-trihydroxy-5,5,9-trimethyl-14-methylidene-6-tetracyclo[11.2.1.01,10.04,9]hexadecanyl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC1(C2CCC34CC(CC(C3C2(CCC1OC5C(C(C(C(O5)CO)O)O)O)C)O)(C(=C)C4O)O)C
SMILES (Isomeric) CC1([C@H]2CC[C@@]34C[C@@](C[C@@H]([C@H]3C2(CCC1O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)O)(C(=C)C4O)O)C
InChI InChI=1S/C26H42O9/c1-12-21(32)25-8-5-15-23(2,3)16(35-22-19(31)18(30)17(29)14(10-27)34-22)6-7-24(15,4)20(25)13(28)9-26(12,33)11-25/h13-22,27-33H,1,5-11H2,2-4H3/t13-,14+,15+,16?,17+,18-,19+,20-,21?,22-,24?,25+,26-/m0/s1
InChI Key JNSGKIAYGVXQHP-INRRZXOASA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H42O9
Molecular Weight 498.60 g/mol
Exact Mass 498.28288291 g/mol
Topological Polar Surface Area (TPSA) 160.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -0.17
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1R,4S,10S,11S,13R)-11,13,15-trihydroxy-5,5,9-trimethyl-14-methylidene-6-tetracyclo[11.2.1.01,10.04,9]hexadecanyl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8006 80.06%
Caco-2 - 0.8282 82.82%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6350 63.50%
OATP2B1 inhibitior - 0.7207 72.07%
OATP1B1 inhibitior + 0.8608 86.08%
OATP1B3 inhibitior + 0.8810 88.10%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7542 75.42%
BSEP inhibitior - 0.8635 86.35%
P-glycoprotein inhibitior - 0.6316 63.16%
P-glycoprotein substrate - 0.8148 81.48%
CYP3A4 substrate + 0.6975 69.75%
CYP2C9 substrate - 0.7922 79.22%
CYP2D6 substrate - 0.8371 83.71%
CYP3A4 inhibition - 0.8500 85.00%
CYP2C9 inhibition - 0.6755 67.55%
CYP2C19 inhibition - 0.8066 80.66%
CYP2D6 inhibition - 0.9336 93.36%
CYP1A2 inhibition - 0.8010 80.10%
CYP2C8 inhibition + 0.4586 45.86%
CYP inhibitory promiscuity - 0.9049 90.49%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7377 73.77%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9396 93.96%
Skin irritation - 0.5612 56.12%
Skin corrosion - 0.9397 93.97%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8322 83.22%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7173 71.73%
skin sensitisation - 0.8783 87.83%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity - 0.5574 55.74%
Acute Oral Toxicity (c) III 0.4046 40.46%
Estrogen receptor binding + 0.6538 65.38%
Androgen receptor binding + 0.6884 68.84%
Thyroid receptor binding + 0.5621 56.21%
Glucocorticoid receptor binding + 0.6008 60.08%
Aromatase binding + 0.6821 68.21%
PPAR gamma - 0.4905 49.05%
Honey bee toxicity - 0.7670 76.70%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5950 59.50%
Fish aquatic toxicity + 0.9744 97.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.26% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.27% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.84% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 89.63% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.55% 97.25%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.23% 95.89%
CHEMBL2581 P07339 Cathepsin D 86.02% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.46% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.03% 96.21%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.91% 95.50%
CHEMBL221 P23219 Cyclooxygenase-1 83.71% 90.17%
CHEMBL1977 P11473 Vitamin D receptor 83.62% 99.43%
CHEMBL237 P41145 Kappa opioid receptor 81.63% 98.10%
CHEMBL218 P21554 Cannabinoid CB1 receptor 81.61% 96.61%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.07% 95.83%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.43% 86.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.24% 100.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.05% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Isodon pharicus

Cross-Links

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PubChem 6325426
NPASS NPC88800
LOTUS LTS0146546
wikiData Q105132083