(2E,5R,6E)-9-[(3R,4R)-5,5-dimethyl-1-oxaspiro[2.5]octan-4-yl]-3,7-dimethylnona-2,6-diene-1,5-diol

Details

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Internal ID c4cd9e65-f65f-4168-bb34-1074eab9488f
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Retinoids
IUPAC Name (2E,5R,6E)-9-[(3R,4R)-5,5-dimethyl-1-oxaspiro[2.5]octan-4-yl]-3,7-dimethylnona-2,6-diene-1,5-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H34O3/c1-15(12-17(22)13-16(2)8-11-21)6-7-18-19(3,4)9-5-10-20(18)14-23-20/h8,12,17-18,21-22H,5-7,9-11,13-14H2,1-4H3/b15-12+,16-8+/t17-,18+,20-/m0/s1
InChI Key YMFCPGQTJFFGBT-YTHUXSMLSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H34O3
Molecular Weight 322.50 g/mol
Exact Mass 322.25079494 g/mol
Topological Polar Surface Area (TPSA) 53.00 Ų
XlogP 4.00
Atomic LogP (AlogP) 4.00
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2E,5R,6E)-9-[(3R,4R)-5,5-dimethyl-1-oxaspiro[2.5]octan-4-yl]-3,7-dimethylnona-2,6-diene-1,5-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9623 96.23%
Caco-2 + 0.6509 65.09%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Lysosomes 0.4832 48.32%
OATP2B1 inhibitior - 0.8558 85.58%
OATP1B1 inhibitior + 0.8332 83.32%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.6636 66.36%
P-glycoprotein inhibitior - 0.8094 80.94%
P-glycoprotein substrate - 0.7434 74.34%
CYP3A4 substrate + 0.6000 60.00%
CYP2C9 substrate - 0.8075 80.75%
CYP2D6 substrate - 0.7699 76.99%
CYP3A4 inhibition - 0.5538 55.38%
CYP2C9 inhibition - 0.7623 76.23%
CYP2C19 inhibition - 0.7504 75.04%
CYP2D6 inhibition - 0.8979 89.79%
CYP1A2 inhibition - 0.7965 79.65%
CYP2C8 inhibition - 0.6796 67.96%
CYP inhibitory promiscuity - 0.8177 81.77%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8700 87.00%
Carcinogenicity (trinary) Non-required 0.6209 62.09%
Eye corrosion - 0.9688 96.88%
Eye irritation - 0.7315 73.15%
Skin irritation - 0.6815 68.15%
Skin corrosion - 0.9491 94.91%
Ames mutagenesis - 0.6870 68.70%
Human Ether-a-go-go-Related Gene inhibition - 0.5194 51.94%
Micronuclear - 0.7500 75.00%
Hepatotoxicity - 0.6567 65.67%
skin sensitisation + 0.5059 50.59%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity - 0.5889 58.89%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity + 0.5352 53.52%
Acute Oral Toxicity (c) III 0.6922 69.22%
Estrogen receptor binding + 0.5537 55.37%
Androgen receptor binding - 0.5308 53.08%
Thyroid receptor binding + 0.6431 64.31%
Glucocorticoid receptor binding + 0.5819 58.19%
Aromatase binding + 0.5718 57.18%
PPAR gamma + 0.5912 59.12%
Honey bee toxicity - 0.8450 84.50%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity + 0.8542 85.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.65% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.98% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.86% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.94% 97.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 90.13% 95.50%
CHEMBL2581 P07339 Cathepsin D 89.09% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.23% 100.00%
CHEMBL233 P35372 Mu opioid receptor 87.26% 97.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.83% 94.45%
CHEMBL237 P41145 Kappa opioid receptor 84.45% 98.10%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.82% 100.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 83.58% 98.75%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.28% 97.28%
CHEMBL4370 P16662 UDP-glucuronosyltransferase 2B7 82.18% 100.00%
CHEMBL4040 P28482 MAP kinase ERK2 81.73% 83.82%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.24% 95.89%
CHEMBL4073 P09237 Matrix metalloproteinase 7 81.02% 97.56%
CHEMBL5555 O00767 Acyl-CoA desaturase 80.94% 97.50%
CHEMBL2413 P32246 C-C chemokine receptor type 1 80.35% 89.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.19% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ophryosporus floribundus

Cross-Links

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PubChem 162852711
LOTUS LTS0210029
wikiData Q105350494