2-[5-[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3-hydroxy-2-(hydroxymethyl)-6-[[6,6,10,14,16-pentamethyl-18-(2-methylprop-1-enyl)-16-(3,4,5-trihydroxyoxan-2-yl)oxy-19,21-dioxahexacyclo[18.2.1.01,14.02,11.05,10.015,20]tricosan-7-yl]oxy]oxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 1f8c9d70-80c5-4a3d-97f6-3f1d8dc08233
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name 2-[5-[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3-hydroxy-2-(hydroxymethyl)-6-[[6,6,10,14,16-pentamethyl-18-(2-methylprop-1-enyl)-16-(3,4,5-trihydroxyoxan-2-yl)oxy-19,21-dioxahexacyclo[18.2.1.01,14.02,11.05,10.015,20]tricosan-7-yl]oxy]oxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C52H84O22/c1-22(2)14-23-15-50(7,74-42-37(62)32(57)26(56)19-65-42)46-49(6)13-10-24-25(51(49)20-52(46,73-23)66-21-51)8-9-30-47(3,4)31(11-12-48(24,30)5)70-45-41(72-43-38(63)34(59)28(17-54)68-43)40(35(60)29(18-55)69-45)71-44-39(64)36(61)33(58)27(16-53)67-44/h14,23-46,53-64H,8-13,15-21H2,1-7H3
InChI Key PMAKLEKVDHFGNE-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C52H84O22
Molecular Weight 1061.20 g/mol
Exact Mass 1060.54542430 g/mol
Topological Polar Surface Area (TPSA) 335.00 Ų
XlogP 0.60
Atomic LogP (AlogP) -1.57
H-Bond Acceptor 22
H-Bond Donor 12
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-[5-[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3-hydroxy-2-(hydroxymethyl)-6-[[6,6,10,14,16-pentamethyl-18-(2-methylprop-1-enyl)-16-(3,4,5-trihydroxyoxan-2-yl)oxy-19,21-dioxahexacyclo[18.2.1.01,14.02,11.05,10.015,20]tricosan-7-yl]oxy]oxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7395 73.95%
Caco-2 - 0.8883 88.83%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7487 74.87%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8215 82.15%
OATP1B3 inhibitior + 0.8885 88.85%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8298 82.98%
P-glycoprotein inhibitior + 0.7476 74.76%
P-glycoprotein substrate + 0.5413 54.13%
CYP3A4 substrate + 0.7492 74.92%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9226 92.26%
CYP2C9 inhibition - 0.8642 86.42%
CYP2C19 inhibition - 0.9010 90.10%
CYP2D6 inhibition - 0.9274 92.74%
CYP1A2 inhibition - 0.9012 90.12%
CYP2C8 inhibition + 0.7498 74.98%
CYP inhibitory promiscuity - 0.9197 91.97%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5717 57.17%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9018 90.18%
Skin irritation - 0.5769 57.69%
Skin corrosion - 0.9449 94.49%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8087 80.87%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.8209 82.09%
skin sensitisation - 0.8994 89.94%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.9083 90.83%
Acute Oral Toxicity (c) I 0.6698 66.98%
Estrogen receptor binding + 0.7736 77.36%
Androgen receptor binding + 0.7792 77.92%
Thyroid receptor binding - 0.5090 50.90%
Glucocorticoid receptor binding + 0.7153 71.53%
Aromatase binding + 0.6493 64.93%
PPAR gamma + 0.7820 78.20%
Honey bee toxicity - 0.5460 54.60%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.9306 93.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.90% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.27% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.44% 96.61%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 90.45% 91.24%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 89.57% 95.50%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 89.51% 98.75%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.31% 89.05%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 89.26% 97.47%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.80% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 88.67% 95.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.28% 94.45%
CHEMBL325 Q13547 Histone deacetylase 1 87.50% 95.92%
CHEMBL5255 O00206 Toll-like receptor 4 87.45% 92.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.88% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.10% 97.25%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.74% 97.14%
CHEMBL2581 P07339 Cathepsin D 85.48% 98.95%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 84.26% 100.00%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 83.76% 97.86%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.75% 95.89%
CHEMBL3922 P50579 Methionine aminopeptidase 2 83.71% 97.28%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.65% 89.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 83.43% 97.53%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.37% 92.62%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 83.19% 96.77%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.99% 94.33%
CHEMBL237 P41145 Kappa opioid receptor 81.66% 98.10%
CHEMBL2096618 P11274 Bcr/Abl fusion protein 81.64% 85.83%
CHEMBL1937 Q92769 Histone deacetylase 2 81.55% 94.75%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.71% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.10% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 163044825
LOTUS LTS0146960
wikiData Q105211355