(2S,3S,4S,5S,6R)-2-[[(1R,3R,5S,8S,9S,10S,13S,14S,16S,17R)-3-hydroxy-17-[(2S,3S)-3-hydroxy-6-methylhept-5-en-2-yl]-10,13-dimethyl-1-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-6-methyloxane-3,4,5-triol

Details

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Internal ID 9ddda925-05d8-4256-9c3d-39de6f764491
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2S,3S,4S,5S,6R)-2-[[(1R,3R,5S,8S,9S,10S,13S,14S,16S,17R)-3-hydroxy-17-[(2S,3S)-3-hydroxy-6-methylhept-5-en-2-yl]-10,13-dimethyl-1-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CC3C4CCC5CC(CC(C5(C4CCC3(C2C(C)C(CC=C(C)C)O)C)C)OC6C(C(C(C(O6)C)O)O)O)O)O)O)O
SMILES (Isomeric) C[C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O[C@H]2C[C@H]3[C@@H]4CC[C@H]5C[C@H](C[C@H]([C@@]5([C@H]4CC[C@@]3([C@H]2[C@H](C)[C@H](CC=C(C)C)O)C)C)O[C@H]6[C@@H]([C@@H]([C@H]([C@@H](O6)C)O)O)O)O)O)O)O
InChI InChI=1S/C39H66O12/c1-17(2)8-11-26(41)18(3)29-27(50-36-34(46)32(44)30(42)19(4)48-36)16-25-23-10-9-21-14-22(40)15-28(39(21,7)24(23)12-13-38(25,29)6)51-37-35(47)33(45)31(43)20(5)49-37/h8,18-37,40-47H,9-16H2,1-7H3/t18-,19-,20+,21+,22-,23-,24+,25+,26+,27+,28-,29+,30-,31+,32+,33-,34+,35-,36-,37+,38+,39+/m1/s1
InChI Key BAWUURNLFXGLTO-GYWJBNCRSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C39H66O12
Molecular Weight 726.90 g/mol
Exact Mass 726.45542754 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 2.00
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,4S,5S,6R)-2-[[(1R,3R,5S,8S,9S,10S,13S,14S,16S,17R)-3-hydroxy-17-[(2S,3S)-3-hydroxy-6-methylhept-5-en-2-yl]-10,13-dimethyl-1-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8107 81.07%
Caco-2 - 0.8673 86.73%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.5958 59.58%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8757 87.57%
OATP1B3 inhibitior + 0.8695 86.95%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.7144 71.44%
P-glycoprotein inhibitior + 0.6861 68.61%
P-glycoprotein substrate - 0.5432 54.32%
CYP3A4 substrate + 0.7196 71.96%
CYP2C9 substrate - 0.8028 80.28%
CYP2D6 substrate - 0.8179 81.79%
CYP3A4 inhibition - 0.8624 86.24%
CYP2C9 inhibition - 0.8933 89.33%
CYP2C19 inhibition - 0.8860 88.60%
CYP2D6 inhibition - 0.9310 93.10%
CYP1A2 inhibition - 0.8913 89.13%
CYP2C8 inhibition + 0.6471 64.71%
CYP inhibitory promiscuity - 0.8832 88.32%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6172 61.72%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9193 91.93%
Skin irritation + 0.5339 53.39%
Skin corrosion - 0.9308 93.08%
Ames mutagenesis - 0.7255 72.55%
Human Ether-a-go-go-Related Gene inhibition + 0.7777 77.77%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.6534 65.34%
skin sensitisation - 0.8259 82.59%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.9083 90.83%
Acute Oral Toxicity (c) I 0.5907 59.07%
Estrogen receptor binding + 0.7031 70.31%
Androgen receptor binding + 0.6498 64.98%
Thyroid receptor binding - 0.5416 54.16%
Glucocorticoid receptor binding + 0.5450 54.50%
Aromatase binding + 0.6594 65.94%
PPAR gamma + 0.6914 69.14%
Honey bee toxicity - 0.6438 64.38%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9624 96.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.56% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.38% 96.09%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 92.96% 95.58%
CHEMBL2007625 O75874 Isocitrate dehydrogenase [NADP] cytoplasmic 92.00% 99.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.96% 97.36%
CHEMBL221 P23219 Cyclooxygenase-1 91.34% 90.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.30% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.24% 97.09%
CHEMBL237 P41145 Kappa opioid receptor 90.47% 98.10%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.90% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.21% 100.00%
CHEMBL203 P00533 Epidermal growth factor receptor erbB1 88.99% 97.34%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.81% 89.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.46% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.21% 95.89%
CHEMBL2094135 Q96BI3 Gamma-secretase 86.94% 98.05%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.21% 86.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.08% 100.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 84.99% 89.50%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 84.11% 95.36%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.08% 92.62%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.83% 96.38%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 82.73% 91.03%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 82.56% 92.50%
CHEMBL2179 P04062 Beta-glucocerebrosidase 82.48% 85.31%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.34% 91.07%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.00% 89.00%
CHEMBL2581 P07339 Cathepsin D 81.90% 98.95%
CHEMBL259 P32245 Melanocortin receptor 4 80.51% 95.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ornithogalum thyrsoides

Cross-Links

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PubChem 162870434
LOTUS LTS0018591
wikiData Q104922501