(2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-6-[(1S,2S,3'S,4S,5'R,6S,7S,8R,9S,12S,13R,16S)-3'-hydroxy-5'-(hydroxymethyl)-7,9,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-piperidine]-16-yl]oxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID e9c623f5-7f1f-4751-8671-90114fd88cf1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-6-[(1S,2S,3'S,4S,5'R,6S,7S,8R,9S,12S,13R,16S)-3'-hydroxy-5'-(hydroxymethyl)-7,9,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-piperidine]-16-yl]oxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C45H73NO17/c1-18-30-27(63-45(18)29(49)12-21(16-47)15-46-45)14-26-24-7-6-22-13-23(8-10-43(22,4)25(24)9-11-44(26,30)5)59-42-39(62-41-36(55)34(53)32(51)20(3)58-41)37(56)38(28(17-48)60-42)61-40-35(54)33(52)31(50)19(2)57-40/h6,18-21,23-42,46-56H,7-17H2,1-5H3/t18-,19-,20-,21+,23-,24+,25-,26-,27-,28+,29-,30-,31-,32-,33+,34+,35+,36+,37-,38+,39+,40-,41-,42+,43-,44-,45-/m0/s1
InChI Key VNISUUJOAPABTP-HQYSTUFRSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C45H73NO17
Molecular Weight 900.10 g/mol
Exact Mass 899.48784986 g/mol
Topological Polar Surface Area (TPSA) 279.00 Ų
XlogP -1.10
Atomic LogP (AlogP) -1.24
H-Bond Acceptor 18
H-Bond Donor 11
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-6-[(1S,2S,3'S,4S,5'R,6S,7S,8R,9S,12S,13R,16S)-3'-hydroxy-5'-(hydroxymethyl)-7,9,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-piperidine]-16-yl]oxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6748 67.48%
Caco-2 - 0.8855 88.55%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6063 60.63%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8831 88.31%
OATP1B3 inhibitior + 0.9363 93.63%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.8179 81.79%
P-glycoprotein inhibitior + 0.7298 72.98%
P-glycoprotein substrate + 0.6301 63.01%
CYP3A4 substrate + 0.7451 74.51%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9656 96.56%
CYP2C9 inhibition - 0.9251 92.51%
CYP2C19 inhibition - 0.9175 91.75%
CYP2D6 inhibition - 0.9414 94.14%
CYP1A2 inhibition - 0.8938 89.38%
CYP2C8 inhibition + 0.7557 75.57%
CYP inhibitory promiscuity - 0.8420 84.20%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.4548 45.48%
Eye corrosion - 0.9864 98.64%
Eye irritation - 0.9110 91.10%
Skin irritation - 0.7012 70.12%
Skin corrosion - 0.9221 92.21%
Ames mutagenesis - 0.8900 89.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8202 82.02%
Micronuclear + 0.6300 63.00%
Hepatotoxicity - 0.9250 92.50%
skin sensitisation - 0.8482 84.82%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9889 98.89%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.8674 86.74%
Acute Oral Toxicity (c) III 0.6491 64.91%
Estrogen receptor binding + 0.8513 85.13%
Androgen receptor binding + 0.6911 69.11%
Thyroid receptor binding - 0.5314 53.14%
Glucocorticoid receptor binding + 0.6136 61.36%
Aromatase binding + 0.6880 68.80%
PPAR gamma + 0.7626 76.26%
Honey bee toxicity - 0.6058 60.58%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.7076 70.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.09% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.25% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.20% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.54% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.03% 97.25%
CHEMBL218 P21554 Cannabinoid CB1 receptor 94.52% 96.61%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.12% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.39% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.02% 94.00%
CHEMBL1914 P06276 Butyrylcholinesterase 89.34% 95.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.18% 89.05%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.97% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.85% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.43% 95.89%
CHEMBL237 P41145 Kappa opioid receptor 88.08% 98.10%
CHEMBL2581 P07339 Cathepsin D 87.39% 98.95%
CHEMBL1937 Q92769 Histone deacetylase 2 84.71% 94.75%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.54% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.37% 86.33%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.00% 92.94%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.69% 96.21%
CHEMBL1871 P10275 Androgen Receptor 81.02% 96.43%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.99% 95.50%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.24% 93.04%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.24% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum donianum

Cross-Links

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PubChem 21636348
LOTUS LTS0191835
wikiData Q105289657