(1R,2R,5R,6R,7S,11R)-1'-[[(3R,3aS,4R,5S,6aS)-4-(hydroxymethyl)-5-methyl-2-oxo-3,3a,4,5,6,6a-hexahydrocyclopenta[b]furan-3-yl]methyl]-2-ethenyl-4-methylspiro[9-oxa-4-azatetracyclo[6.3.1.02,6.05,11]dodecane-7,3'-indole]-2'-one

Details

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Internal ID 4c527ff4-6db5-4766-9252-3af12e7ebb62
Taxonomy Alkaloids and derivatives > Gelsemium alkaloids
IUPAC Name (1R,2R,5R,6R,7S,11R)-1'-[[(3R,3aS,4R,5S,6aS)-4-(hydroxymethyl)-5-methyl-2-oxo-3,3a,4,5,6,6a-hexahydrocyclopenta[b]furan-3-yl]methyl]-2-ethenyl-4-methylspiro[9-oxa-4-azatetracyclo[6.3.1.02,6.05,11]dodecane-7,3'-indole]-2'-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C30H36N2O5/c1-4-29-14-31(3)25-18-13-36-23(10-20(18)29)30(26(25)29)19-7-5-6-8-21(19)32(28(30)35)11-16-24-17(12-33)15(2)9-22(24)37-27(16)34/h4-8,15-18,20,22-26,33H,1,9-14H2,2-3H3/t15-,16-,17+,18+,20+,22-,23?,24+,25-,26+,29+,30-/m0/s1
InChI Key QTXUXQFNNPLFTD-KOJXCYITSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C30H36N2O5
Molecular Weight 504.60 g/mol
Exact Mass 504.26242225 g/mol
Topological Polar Surface Area (TPSA) 79.30 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.23
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,2R,5R,6R,7S,11R)-1'-[[(3R,3aS,4R,5S,6aS)-4-(hydroxymethyl)-5-methyl-2-oxo-3,3a,4,5,6,6a-hexahydrocyclopenta[b]furan-3-yl]methyl]-2-ethenyl-4-methylspiro[9-oxa-4-azatetracyclo[6.3.1.02,6.05,11]dodecane-7,3'-indole]-2'-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7389 73.89%
Caco-2 - 0.6834 68.34%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.4051 40.51%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8728 87.28%
OATP1B3 inhibitior + 0.9380 93.80%
MATE1 inhibitior - 0.9046 90.46%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.8331 83.31%
P-glycoprotein inhibitior + 0.7065 70.65%
P-glycoprotein substrate + 0.6954 69.54%
CYP3A4 substrate + 0.6987 69.87%
CYP2C9 substrate - 0.8078 80.78%
CYP2D6 substrate - 0.7210 72.10%
CYP3A4 inhibition - 0.5675 56.75%
CYP2C9 inhibition - 0.8107 81.07%
CYP2C19 inhibition - 0.7653 76.53%
CYP2D6 inhibition - 0.9453 94.53%
CYP1A2 inhibition - 0.8614 86.14%
CYP2C8 inhibition + 0.5952 59.52%
CYP inhibitory promiscuity - 0.8897 88.97%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.5357 53.57%
Eye corrosion - 0.9863 98.63%
Eye irritation - 0.9493 94.93%
Skin irritation - 0.7856 78.56%
Skin corrosion - 0.9310 93.10%
Ames mutagenesis + 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4071 40.71%
Micronuclear + 0.7000 70.00%
Hepatotoxicity + 0.6375 63.75%
skin sensitisation - 0.8526 85.26%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.6518 65.18%
Acute Oral Toxicity (c) III 0.5710 57.10%
Estrogen receptor binding + 0.7937 79.37%
Androgen receptor binding + 0.7436 74.36%
Thyroid receptor binding - 0.5279 52.79%
Glucocorticoid receptor binding + 0.7248 72.48%
Aromatase binding + 0.6466 64.66%
PPAR gamma - 0.4902 49.02%
Honey bee toxicity - 0.6996 69.96%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9770 97.70%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.20% 96.09%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 95.00% 93.40%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.96% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.06% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.52% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.34% 97.25%
CHEMBL2581 P07339 Cathepsin D 88.84% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.76% 86.33%
CHEMBL5805 Q9NR97 Toll-like receptor 8 81.92% 96.25%
CHEMBL299 P17252 Protein kinase C alpha 81.53% 98.03%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.22% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.10% 97.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.70% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gelsemium elegans

Cross-Links

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PubChem 163194484
LOTUS LTS0071866
wikiData Q105227972