methyl (1R,4aR,7S,7aS)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(methoxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate

Details

Top
Internal ID 874ab39a-2f1f-48b5-9352-cad94addcd53
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1R,4aR,7S,7aS)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(methoxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C18H28O9/c1-8-4-5-9-10(16(22)24-3)6-25-17(12(8)9)27-18-15(21)14(20)13(19)11(26-18)7-23-2/h6,8-9,11-15,17-21H,4-5,7H2,1-3H3/t8-,9-,11+,12-,13+,14-,15+,17+,18-/m0/s1
InChI Key CJZXQEWILILGPN-PWAOKHCYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C18H28O9
Molecular Weight 388.40 g/mol
Exact Mass 388.17333247 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -0.47
H-Bond Acceptor 9
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of methyl (1R,4aR,7S,7aS)-7-methyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(methoxymethyl)oxan-2-yl]oxy-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7492 74.92%
Caco-2 - 0.7319 73.19%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6949 69.49%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7916 79.16%
OATP1B3 inhibitior + 0.9038 90.38%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.8723 87.23%
P-glycoprotein inhibitior - 0.8383 83.83%
P-glycoprotein substrate - 0.7491 74.91%
CYP3A4 substrate + 0.6101 61.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8690 86.90%
CYP3A4 inhibition - 0.9098 90.98%
CYP2C9 inhibition - 0.8647 86.47%
CYP2C19 inhibition - 0.8712 87.12%
CYP2D6 inhibition - 0.8941 89.41%
CYP1A2 inhibition - 0.8262 82.62%
CYP2C8 inhibition - 0.5622 56.22%
CYP inhibitory promiscuity - 0.8698 86.98%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6700 67.00%
Eye corrosion - 0.9879 98.79%
Eye irritation - 0.9730 97.30%
Skin irritation - 0.6706 67.06%
Skin corrosion - 0.9412 94.12%
Ames mutagenesis - 0.5924 59.24%
Human Ether-a-go-go-Related Gene inhibition - 0.5052 50.52%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation - 0.8746 87.46%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6656 66.56%
Acute Oral Toxicity (c) III 0.4808 48.08%
Estrogen receptor binding + 0.5655 56.55%
Androgen receptor binding - 0.5608 56.08%
Thyroid receptor binding - 0.4883 48.83%
Glucocorticoid receptor binding - 0.6247 62.47%
Aromatase binding - 0.6234 62.34%
PPAR gamma - 0.6613 66.13%
Honey bee toxicity - 0.9194 91.94%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.7633 76.33%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.70% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.11% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.95% 91.11%
CHEMBL2581 P07339 Cathepsin D 91.02% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.48% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 89.46% 92.50%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 88.36% 85.14%
CHEMBL3401 O75469 Pregnane X receptor 83.62% 94.73%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 83.25% 94.80%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.76% 94.33%
CHEMBL4208 P20618 Proteasome component C5 81.22% 90.00%
CHEMBL5028 O14672 ADAM10 81.20% 97.50%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.64% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.61% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.44% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.00% 86.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Nepeta grandiflora

Cross-Links

Top
PubChem 102121818
LOTUS LTS0047773
wikiData Q104961995