28-deoxystambomycin A

Details

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Internal ID 68cd8db4-38b4-4b4a-a6f4-969a316b3084
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (6E,30E,42E,44E)-50-[(2R,3R,4S,5S,6R)-4-(dimethylamino)-3,5-dihydroxy-6-methyloxan-2-yl]oxy-1,8,10,14,16,20,22,24,28,32,34,38,40,46-tetradecahydroxy-5,15,19,31,39,45,47,51-octamethyl-29-(4-methylhexyl)-4,52-dioxabicyclo[46.3.1]dopentaconta-6,30,42,44-tetraen-3-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C73H133NO21/c1-14-42(2)21-17-23-52-35-45(5)64(86)38-55(77)26-19-29-59(81)47(7)58(80)27-16-15-22-44(4)69(88)49(9)65-40-66(94-72-71(90)68(74(12)13)70(89)51(11)93-72)50(10)73(91,95-65)41-67(87)92-46(6)32-33-56(78)36-53(75)24-18-28-60(82)48(8)61(83)34-31-43(3)63(85)39-57(79)37-54(76)25-20-30-62(52)84/h15-16,22,32-33,35,42-43,46-66,68-72,75-86,88-91H,14,17-21,23-31,34,36-41H2,1-13H3/b16-15+,33-32+,44-22+,45-35+/t42?,43?,46?,47?,48?,49?,50?,51-,52?,53?,54?,55?,56?,57?,58?,59?,60?,61?,62?,63?,64?,65?,66?,68+,69?,70-,71-,72+,73?/m1/s1
InChI Key UEYLSFDKSXZPKX-RBYDBDFPSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C73H133NO21
Molecular Weight 1360.80 g/mol
Exact Mass 1359.93701025 g/mol
Topological Polar Surface Area (TPSA) 381.00 Ų
XlogP 5.80
Atomic LogP (AlogP) 5.53
H-Bond Acceptor 22
H-Bond Donor 16
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 28-deoxystambomycin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4845 48.45%
Caco-2 - 0.8615 86.15%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.4705 47.05%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8081 80.81%
OATP1B3 inhibitior + 0.9237 92.37%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.9697 96.97%
P-glycoprotein inhibitior + 0.7426 74.26%
P-glycoprotein substrate + 0.8245 82.45%
CYP3A4 substrate + 0.7565 75.65%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8438 84.38%
CYP3A4 inhibition - 0.8493 84.93%
CYP2C9 inhibition - 0.8411 84.11%
CYP2C19 inhibition - 0.8134 81.34%
CYP2D6 inhibition - 0.8841 88.41%
CYP1A2 inhibition - 0.8449 84.49%
CYP2C8 inhibition + 0.8143 81.43%
CYP inhibitory promiscuity - 0.9037 90.37%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5457 54.57%
Eye corrosion - 0.9859 98.59%
Eye irritation - 0.8974 89.74%
Skin irritation - 0.7339 73.39%
Skin corrosion - 0.9213 92.13%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7766 77.66%
Micronuclear + 0.5800 58.00%
Hepatotoxicity + 0.5750 57.50%
skin sensitisation - 0.8522 85.22%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.6930 69.30%
Acute Oral Toxicity (c) III 0.6832 68.32%
Estrogen receptor binding + 0.7976 79.76%
Androgen receptor binding + 0.7195 71.95%
Thyroid receptor binding + 0.6807 68.07%
Glucocorticoid receptor binding + 0.8062 80.62%
Aromatase binding + 0.5988 59.88%
PPAR gamma + 0.8358 83.58%
Honey bee toxicity - 0.6274 62.74%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.8963 89.63%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 99.05% 96.77%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.92% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.51% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 95.22% 95.93%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 94.98% 96.38%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.83% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.45% 95.56%
CHEMBL3837 P07711 Cathepsin L 94.32% 96.61%
CHEMBL3359 P21462 Formyl peptide receptor 1 93.56% 93.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.51% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 91.99% 94.73%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 91.29% 98.75%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.19% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.92% 95.89%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 90.16% 96.90%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.50% 90.08%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.31% 95.89%
CHEMBL1937 Q92769 Histone deacetylase 2 86.97% 94.75%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.38% 91.07%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.11% 96.21%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.91% 86.33%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.18% 93.03%
CHEMBL1871 P10275 Androgen Receptor 83.91% 96.43%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 83.91% 100.00%
CHEMBL4105838 Q96GG9 DCN1-like protein 1 83.82% 95.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.66% 100.00%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 82.52% 95.71%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 82.22% 96.47%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 82.19% 91.03%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 82.08% 96.37%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.48% 89.00%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 80.78% 92.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.57% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.37% 94.00%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 80.18% 86.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 146684665
LOTUS LTS0021507
wikiData Q105271203