28-dehydroxymethyl-28,30-dihydroxyrifamycin W

Details

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Internal ID 44813dfb-5a72-43fd-a57d-a61427da089d
Taxonomy Benzenoids > Naphthalenes > Naphthoquinones
IUPAC Name (7Z,9R,10R,11R,12S,13S,14S,15R,16S,17S,18E,20Z)-2,4,9,10,12,14,16-heptahydroxy-21-(hydroxymethyl)-3,7,11,13,15,17-hexamethyl-23-azatricyclo[22.3.1.05,27]octacosa-1,3,5(27),7,18,20,24-heptaene-6,22,26,28-tetrone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C34H43NO12/c1-13-8-7-9-19(12-36)34(47)35-20-11-21(37)23-24(31(44)18(6)32(45)25(23)33(20)46)27(40)14(2)10-22(38)30(43)17(5)29(42)16(4)28(41)15(3)26(13)39/h7-11,13,15-17,22,26,28-30,36,38-39,41-45H,12H2,1-6H3,(H,35,47)/b8-7+,14-10-,19-9-/t13-,15+,16-,17+,22+,26-,28-,29-,30+/m0/s1
InChI Key MUMTYXMHUQYNAX-YHDZRBOXSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C34H43NO12
Molecular Weight 657.70 g/mol
Exact Mass 657.27852581 g/mol
Topological Polar Surface Area (TPSA) 242.00 Ų
XlogP 1.60
Atomic LogP (AlogP) 0.75
H-Bond Acceptor 12
H-Bond Donor 9
Rotatable Bonds 1

Synonyms

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(7Z,9R,10R,11R,12S,13S,14S,15R,16S,17S,18E,20Z)-2,4,9,10,12,14,16-heptahydroxy-21-(hydroxymethyl)-3,7,11,13,15,17-hexamethyl-23-azatricyclo[22.3.1.05,27]octacosa-1,3,5(27),7,18,20,24-heptaene-6,22,26,28-tetrone
(7Z,9R,10R,11R,12S,13S,14S,15R,16S,17S,18E,20Z)-2,4,9,10,12,14,16-heptahydroxy-21-(hydroxymethyl)-3,7,11,13,15,17-hexamethyl-23-azatricyclo(22.3.1.05,27)octacosa-1,3,5(27),7,18,20,24-heptaene-6,22,26,28-tetrone
RefChem:89996
CHEBI:225114

2D Structure

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2D Structure of 28-dehydroxymethyl-28,30-dihydroxyrifamycin W

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9783 97.83%
Caco-2 - 0.8675 86.75%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.6510 65.10%
OATP2B1 inhibitior - 0.5611 56.11%
OATP1B1 inhibitior + 0.7873 78.73%
OATP1B3 inhibitior + 0.9356 93.56%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.8671 86.71%
P-glycoprotein inhibitior + 0.6141 61.41%
P-glycoprotein substrate + 0.5886 58.86%
CYP3A4 substrate + 0.6449 64.49%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8838 88.38%
CYP3A4 inhibition - 0.7728 77.28%
CYP2C9 inhibition - 0.7701 77.01%
CYP2C19 inhibition - 0.7562 75.62%
CYP2D6 inhibition - 0.8782 87.82%
CYP1A2 inhibition - 0.5059 50.59%
CYP2C8 inhibition - 0.5916 59.16%
CYP inhibitory promiscuity - 0.6960 69.60%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9443 94.43%
Carcinogenicity (trinary) Non-required 0.6781 67.81%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9263 92.63%
Skin irritation - 0.7941 79.41%
Skin corrosion - 0.9413 94.13%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7093 70.93%
Micronuclear + 0.8300 83.00%
Hepatotoxicity + 0.6272 62.72%
skin sensitisation - 0.8401 84.01%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.7352 73.52%
Acute Oral Toxicity (c) III 0.6495 64.95%
Estrogen receptor binding + 0.7555 75.55%
Androgen receptor binding + 0.7008 70.08%
Thyroid receptor binding + 0.5248 52.48%
Glucocorticoid receptor binding + 0.6848 68.48%
Aromatase binding + 0.5436 54.36%
PPAR gamma + 0.7288 72.88%
Honey bee toxicity - 0.7762 77.62%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity + 0.7747 77.47%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.50% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.70% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 95.69% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.28% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.87% 96.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.75% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.71% 89.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 83.76% 90.08%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 83.70% 91.71%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 83.50% 95.64%
CHEMBL226 P30542 Adenosine A1 receptor 83.30% 95.93%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.00% 93.03%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 81.68% 96.67%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.28% 93.99%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.25% 94.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.19% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589327
LOTUS LTS0129631
wikiData Q105172571