methyl (3aR,4R,5R,6E,10S,11aS)-5-[(2S)-butan-2-yl]oxy-4-[(2S,3S)-2,3-dimethyloxirane-2-carbonyl]oxy-10-(hydroxymethyl)-3-methylidene-2-oxo-3a,4,5,8,9,10,11,11a-octahydrocyclodeca[b]furan-6-carboxylate

Details

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Internal ID 7896a5e7-f5cf-4e03-a04e-44f46624c30b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Sesquiterpene lactones > Germacranolides and derivatives
IUPAC Name methyl (3aR,4R,5R,6E,10S,11aS)-5-[(2S)-butan-2-yl]oxy-4-[(2S,3S)-2,3-dimethyloxirane-2-carbonyl]oxy-10-(hydroxymethyl)-3-methylidene-2-oxo-3a,4,5,8,9,10,11,11a-octahydrocyclodeca[b]furan-6-carboxylate
SMILES (Canonical) CCC(C)OC1C(C2C(CC(CCC=C1C(=O)OC)CO)OC(=O)C2=C)OC(=O)C3(C(O3)C)C
SMILES (Isomeric) CC[C@H](C)O[C@H]/1[C@@H]([C@H]2[C@H](C[C@H](CC/C=C1/C(=O)OC)CO)OC(=O)C2=C)OC(=O)[C@@]3([C@@H](O3)C)C
InChI InChI=1S/C25H36O9/c1-7-13(2)31-20-17(23(28)30-6)10-8-9-16(12-26)11-18-19(14(3)22(27)32-18)21(20)33-24(29)25(5)15(4)34-25/h10,13,15-16,18-21,26H,3,7-9,11-12H2,1-2,4-6H3/b17-10+/t13-,15-,16-,18-,19+,20+,21+,25-/m0/s1
InChI Key RNWVAMAILZZWBT-PSBFNQLOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H36O9
Molecular Weight 480.50 g/mol
Exact Mass 480.23593272 g/mol
Topological Polar Surface Area (TPSA) 121.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.25
H-Bond Acceptor 9
H-Bond Donor 1
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (3aR,4R,5R,6E,10S,11aS)-5-[(2S)-butan-2-yl]oxy-4-[(2S,3S)-2,3-dimethyloxirane-2-carbonyl]oxy-10-(hydroxymethyl)-3-methylidene-2-oxo-3a,4,5,8,9,10,11,11a-octahydrocyclodeca[b]furan-6-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9605 96.05%
Caco-2 - 0.6104 61.04%
Blood Brain Barrier + 0.8000 80.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.7044 70.44%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8218 82.18%
OATP1B3 inhibitior + 0.9484 94.84%
MATE1 inhibitior - 0.8412 84.12%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.6371 63.71%
P-glycoprotein inhibitior + 0.6871 68.71%
P-glycoprotein substrate + 0.6306 63.06%
CYP3A4 substrate + 0.6855 68.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8820 88.20%
CYP3A4 inhibition + 0.5494 54.94%
CYP2C9 inhibition - 0.7025 70.25%
CYP2C19 inhibition - 0.8004 80.04%
CYP2D6 inhibition - 0.9223 92.23%
CYP1A2 inhibition - 0.7447 74.47%
CYP2C8 inhibition + 0.5887 58.87%
CYP inhibitory promiscuity - 0.8455 84.55%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8943 89.43%
Carcinogenicity (trinary) Non-required 0.4574 45.74%
Eye corrosion - 0.9774 97.74%
Eye irritation - 0.9201 92.01%
Skin irritation - 0.6511 65.11%
Skin corrosion - 0.9246 92.46%
Ames mutagenesis - 0.6370 63.70%
Human Ether-a-go-go-Related Gene inhibition - 0.5145 51.45%
Micronuclear - 0.6600 66.00%
Hepatotoxicity + 0.6677 66.77%
skin sensitisation - 0.8390 83.90%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity + 0.5834 58.34%
Acute Oral Toxicity (c) III 0.4953 49.53%
Estrogen receptor binding + 0.8059 80.59%
Androgen receptor binding + 0.5944 59.44%
Thyroid receptor binding + 0.5300 53.00%
Glucocorticoid receptor binding + 0.8347 83.47%
Aromatase binding + 0.6595 65.95%
PPAR gamma + 0.7223 72.23%
Honey bee toxicity - 0.7267 72.67%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.8991 89.91%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4072 P07858 Cathepsin B 98.22% 93.67%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.64% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.49% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.10% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.27% 97.09%
CHEMBL2996 Q05655 Protein kinase C delta 94.85% 97.79%
CHEMBL2581 P07339 Cathepsin D 93.04% 98.95%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 92.89% 97.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.64% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 88.78% 90.17%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.51% 93.56%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 88.09% 92.88%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 86.96% 93.03%
CHEMBL299 P17252 Protein kinase C alpha 85.87% 98.03%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 85.59% 95.83%
CHEMBL4588 P22894 Matrix metalloproteinase 8 85.55% 94.66%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.73% 95.89%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 84.10% 95.71%
CHEMBL5255 O00206 Toll-like receptor 4 83.94% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.88% 86.33%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.56% 99.23%
CHEMBL340 P08684 Cytochrome P450 3A4 83.05% 91.19%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.15% 91.07%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.84% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.78% 95.56%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.69% 91.24%
CHEMBL5028 O14672 ADAM10 80.30% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tetragonotheca ludoviciana

Cross-Links

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PubChem 162869644
LOTUS LTS0000613
wikiData Q105241880