3-Hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3,4,4a,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylic acid

Details

Top
Internal ID f6b098db-2fee-4349-91d7-0936716c2474
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name 3-hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3,4,4a,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C16H24O11/c17-3-5-1-2-6-8(5)15(26-14(24)9(6)13(22)23)27-16-12(21)11(20)10(19)7(4-18)25-16/h1-2,5-12,14-21,24H,3-4H2,(H,22,23)
InChI Key ICBIUHGRYOEHGD-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C16H24O11
Molecular Weight 392.35 g/mol
Exact Mass 392.13186158 g/mol
Topological Polar Surface Area (TPSA) 186.00 Ų
XlogP -2.40
Atomic LogP (AlogP) -3.41
H-Bond Acceptor 10
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 3-Hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3,4,4a,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6785 67.85%
Caco-2 - 0.9021 90.21%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.6287 62.87%
OATP2B1 inhibitior - 0.8586 85.86%
OATP1B1 inhibitior + 0.8002 80.02%
OATP1B3 inhibitior + 0.9656 96.56%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9741 97.41%
P-glycoprotein inhibitior - 0.8850 88.50%
P-glycoprotein substrate - 0.9470 94.70%
CYP3A4 substrate + 0.5301 53.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8671 86.71%
CYP3A4 inhibition - 0.9325 93.25%
CYP2C9 inhibition - 0.9579 95.79%
CYP2C19 inhibition - 0.8746 87.46%
CYP2D6 inhibition - 0.9098 90.98%
CYP1A2 inhibition - 0.9286 92.86%
CYP2C8 inhibition - 0.7720 77.20%
CYP inhibitory promiscuity - 0.8317 83.17%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6816 68.16%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9638 96.38%
Skin irritation - 0.8391 83.91%
Skin corrosion - 0.9604 96.04%
Ames mutagenesis - 0.7400 74.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6320 63.20%
Micronuclear - 0.7041 70.41%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9011 90.11%
Respiratory toxicity - 0.6444 64.44%
Reproductive toxicity + 0.5778 57.78%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.6340 63.40%
Acute Oral Toxicity (c) IV 0.4779 47.79%
Estrogen receptor binding - 0.6907 69.07%
Androgen receptor binding - 0.5656 56.56%
Thyroid receptor binding - 0.5615 56.15%
Glucocorticoid receptor binding - 0.7126 71.26%
Aromatase binding + 0.5236 52.36%
PPAR gamma + 0.5693 56.93%
Honey bee toxicity - 0.8097 80.97%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7055 70.55%
Fish aquatic toxicity - 0.5771 57.71%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.31% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.19% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 86.82% 96.61%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.66% 99.17%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.97% 97.36%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 81.81% 89.67%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 81.59% 83.57%
CHEMBL2581 P07339 Cathepsin D 81.10% 98.95%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tocoyena formosa

Cross-Links

Top
PubChem 162945427
LOTUS LTS0035818
wikiData Q104168610