(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(2R)-4-[(1S,2S,4S,8S,9S,12S,13S,14R,16S,18S)-14-hydroxy-7,9,13-trimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl]-2-methylbutoxy]oxane-3,4,5-triol

Details

Top
Internal ID 7c2e5b14-3696-4045-a435-73ea2f23d4a3
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(2R)-4-[(1S,2S,4S,8S,9S,12S,13S,14R,16S,18S)-14-hydroxy-7,9,13-trimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl]-2-methylbutoxy]oxane-3,4,5-triol
SMILES (Canonical) CC1=C(OC2C1C3(CCC4C(C3C2)CCC5C4(C(CC(C5)OC6C(C(C(C(O6)CO)O)O)O)O)C)C)CCC(C)COC7C(C(C(C(O7)CO)O)O)O
SMILES (Isomeric) CC1=C(O[C@@H]2[C@H]1[C@]3(CC[C@H]4[C@H]([C@@H]3C2)CC[C@@H]5[C@@]4([C@@H](C[C@H](C5)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)C)C)CC[C@@H](C)CO[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O
InChI InChI=1S/C39H64O14/c1-17(16-49-36-34(47)32(45)30(43)26(14-40)52-36)5-8-24-18(2)29-25(51-24)13-23-21-7-6-19-11-20(50-37-35(48)33(46)31(44)27(15-41)53-37)12-28(42)39(19,4)22(21)9-10-38(23,29)3/h17,19-23,25-37,40-48H,5-16H2,1-4H3/t17-,19+,20+,21-,22+,23+,25+,26-,27-,28-,29+,30-,31-,32+,33+,34-,35-,36-,37-,38+,39+/m1/s1
InChI Key CZTAUPLAICOCJE-HUZURPEXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C39H64O14
Molecular Weight 756.90 g/mol
Exact Mass 756.42960671 g/mol
Topological Polar Surface Area (TPSA) 228.00 Ų
XlogP 1.60
Atomic LogP (AlogP) 0.32
H-Bond Acceptor 14
H-Bond Donor 9
Rotatable Bonds 10

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(2R)-4-[(1S,2S,4S,8S,9S,12S,13S,14R,16S,18S)-14-hydroxy-7,9,13-trimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl]-2-methylbutoxy]oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6879 68.79%
Caco-2 - 0.8789 87.89%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.6925 69.25%
OATP2B1 inhibitior - 0.8651 86.51%
OATP1B1 inhibitior + 0.8758 87.58%
OATP1B3 inhibitior + 0.9297 92.97%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior - 0.4666 46.66%
P-glycoprotein inhibitior + 0.7093 70.93%
P-glycoprotein substrate + 0.5571 55.71%
CYP3A4 substrate + 0.7417 74.17%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8244 82.44%
CYP3A4 inhibition - 0.9320 93.20%
CYP2C9 inhibition - 0.9177 91.77%
CYP2C19 inhibition - 0.9166 91.66%
CYP2D6 inhibition - 0.9363 93.63%
CYP1A2 inhibition - 0.9075 90.75%
CYP2C8 inhibition + 0.6478 64.78%
CYP inhibitory promiscuity - 0.9284 92.84%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5732 57.32%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9177 91.77%
Skin irritation - 0.5215 52.15%
Skin corrosion - 0.9467 94.67%
Ames mutagenesis - 0.7612 76.12%
Human Ether-a-go-go-Related Gene inhibition + 0.7875 78.75%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.9208 92.08%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.8782 87.82%
Acute Oral Toxicity (c) I 0.8055 80.55%
Estrogen receptor binding + 0.7234 72.34%
Androgen receptor binding + 0.7462 74.62%
Thyroid receptor binding - 0.5972 59.72%
Glucocorticoid receptor binding - 0.5285 52.85%
Aromatase binding + 0.6169 61.69%
PPAR gamma + 0.6683 66.83%
Honey bee toxicity - 0.6323 63.23%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9074 90.74%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.74% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.46% 97.09%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 93.66% 92.86%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 93.44% 96.38%
CHEMBL2996 Q05655 Protein kinase C delta 91.86% 97.79%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.12% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.69% 94.45%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 89.30% 96.47%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.48% 100.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.14% 91.11%
CHEMBL237 P41145 Kappa opioid receptor 87.39% 98.10%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.67% 95.89%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.42% 100.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 84.40% 98.05%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.31% 96.61%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.36% 89.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 83.14% 96.21%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 82.75% 89.05%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.60% 94.00%
CHEMBL4581 P52732 Kinesin-like protein 1 82.21% 93.18%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.04% 95.89%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 81.70% 94.23%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.42% 92.62%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 81.41% 92.50%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 80.50% 96.37%
CHEMBL2782 P35610 Acyl coenzyme A:cholesterol acyltransferase 1 80.33% 91.65%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.12% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cordyline stricta

Cross-Links

Top
PubChem 163089025
LOTUS LTS0114008
wikiData Q104973136