(2R,3S,5S)-2-[(3S,5S,6R)-5-hydroxy-6-[[(3S,10R,13R,14S,17S)-14-hydroxy-10,13-dimethyl-17-[1-[(2R,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyethyl]-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-4-methoxy-2-methyloxan-3-yl]oxy-6-(hydroxymethyl)oxane-2,3,4,5-tetrol

Details

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Internal ID e3ebe75f-a9bb-40b5-95f2-41970a2ed389
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2R,3S,5S)-2-[(3S,5S,6R)-5-hydroxy-6-[[(3S,10R,13R,14S,17S)-14-hydroxy-10,13-dimethyl-17-[1-[(2R,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyethyl]-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-4-methoxy-2-methyloxan-3-yl]oxy-6-(hydroxymethyl)oxane-2,3,4,5-tetrol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H66O18/c1-17(53-35-30(47)28(45)26(43)24(15-41)56-35)21-10-13-39(50)23-7-6-19-14-20(8-11-37(19,3)22(23)9-12-38(21,39)4)55-36-31(48)33(52-5)32(18(2)54-36)58-40(51)34(49)29(46)27(44)25(16-42)57-40/h6,17-18,20-36,41-51H,7-16H2,1-5H3/t17?,18?,20-,21+,22?,23?,24?,25?,26+,27+,28?,29?,30-,31-,32-,33?,34-,35+,36-,37-,38+,39-,40+/m0/s1
InChI Key KRQTVRWFDJBIEP-DKCFPBQYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C40H66O18
Molecular Weight 834.90 g/mol
Exact Mass 834.42491525 g/mol
Topological Polar Surface Area (TPSA) 287.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -2.10
H-Bond Acceptor 18
H-Bond Donor 11
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,5S)-2-[(3S,5S,6R)-5-hydroxy-6-[[(3S,10R,13R,14S,17S)-14-hydroxy-10,13-dimethyl-17-[1-[(2R,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyethyl]-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-4-methoxy-2-methyloxan-3-yl]oxy-6-(hydroxymethyl)oxane-2,3,4,5-tetrol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7715 77.15%
Caco-2 - 0.8861 88.61%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6959 69.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8644 86.44%
OATP1B3 inhibitior + 0.8826 88.26%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.4734 47.34%
P-glycoprotein inhibitior + 0.7384 73.84%
P-glycoprotein substrate + 0.6632 66.32%
CYP3A4 substrate + 0.7266 72.66%
CYP2C9 substrate - 0.7968 79.68%
CYP2D6 substrate - 0.8472 84.72%
CYP3A4 inhibition - 0.9339 93.39%
CYP2C9 inhibition - 0.8944 89.44%
CYP2C19 inhibition - 0.8802 88.02%
CYP2D6 inhibition - 0.9332 93.32%
CYP1A2 inhibition - 0.8844 88.44%
CYP2C8 inhibition + 0.7113 71.13%
CYP inhibitory promiscuity - 0.9301 93.01%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5884 58.84%
Eye corrosion - 0.9871 98.71%
Eye irritation - 0.9144 91.44%
Skin irritation - 0.6300 63.00%
Skin corrosion - 0.9388 93.88%
Ames mutagenesis - 0.8054 80.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7660 76.60%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.7250 72.50%
skin sensitisation - 0.8977 89.77%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.8647 86.47%
Acute Oral Toxicity (c) I 0.3909 39.09%
Estrogen receptor binding + 0.8108 81.08%
Androgen receptor binding + 0.7632 76.32%
Thyroid receptor binding - 0.5576 55.76%
Glucocorticoid receptor binding + 0.6334 63.34%
Aromatase binding + 0.6714 67.14%
PPAR gamma + 0.7471 74.71%
Honey bee toxicity - 0.6683 66.83%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5749 57.49%
Fish aquatic toxicity + 0.8636 86.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.14% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.14% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.10% 97.25%
CHEMBL5608 Q16288 NT-3 growth factor receptor 93.63% 95.89%
CHEMBL2581 P07339 Cathepsin D 91.90% 98.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.09% 95.89%
CHEMBL226 P30542 Adenosine A1 receptor 91.02% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.66% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.74% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.19% 86.33%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.91% 89.05%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.85% 97.09%
CHEMBL1937 Q92769 Histone deacetylase 2 88.23% 94.75%
CHEMBL2996 Q05655 Protein kinase C delta 84.86% 97.79%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.76% 89.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.74% 95.83%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.93% 91.07%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.65% 96.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 82.62% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.45% 85.14%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.38% 96.21%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.70% 92.62%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.40% 97.14%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.34% 93.56%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 81.04% 82.50%
CHEMBL5028 O14672 ADAM10 80.23% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 163085206
LOTUS LTS0098644
wikiData Q105145180