Germacra-1(10),4,11(13)-trien-12-oic acid, 6-beta,8-alpha-dihydroxy-, 12,6-lactone,4-hydroxy-2-(hydroxymethyl)crotonate

Details

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Internal ID 0e0e5a1b-b60b-4dc6-b145-6badf5bee17b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Sesquiterpene lactones > Germacranolides and derivatives
IUPAC Name [(3aR,4S,5E,9E,11aS)-6,10-dimethyl-3-methylidene-2-oxo-3a,4,7,8,11,11a-hexahydrocyclodeca[b]furan-4-yl] (E)-4-hydroxy-2-(hydroxymethyl)but-2-enoate
SMILES (Canonical) CC1=CC(C2C(CC(=CCC1)C)OC(=O)C2=C)OC(=O)C(=CCO)CO
SMILES (Isomeric) C/C/1=C\[C@@H]([C@H]2[C@H](C/C(=C/CC1)/C)OC(=O)C2=C)OC(=O)/C(=C/CO)/CO
InChI InChI=1S/C20H26O6/c1-12-5-4-6-13(2)10-17(26-20(24)15(11-22)7-8-21)18-14(3)19(23)25-16(18)9-12/h5,7,10,16-18,21-22H,3-4,6,8-9,11H2,1-2H3/b12-5+,13-10+,15-7+/t16-,17-,18+/m0/s1
InChI Key XUPJVJIAMKIWBR-LNSAHRGWSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H26O6
Molecular Weight 362.40 g/mol
Exact Mass 362.17293854 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP 1.10
Atomic LogP (AlogP) 1.98
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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Germacra-1(10),4,11(13)-trien-12-oic acid, 6-beta,8-alpha-dihydroxy-, 12,6-lactone,4-hydroxy-2-(hydroxymethyl)crotonate

2D Structure

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2D Structure of Germacra-1(10),4,11(13)-trien-12-oic acid, 6-beta,8-alpha-dihydroxy-, 12,6-lactone,4-hydroxy-2-(hydroxymethyl)crotonate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9301 93.01%
Caco-2 + 0.5702 57.02%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.7373 73.73%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9152 91.52%
OATP1B3 inhibitior + 0.9392 93.92%
MATE1 inhibitior - 0.8012 80.12%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.5667 56.67%
P-glycoprotein inhibitior - 0.6992 69.92%
P-glycoprotein substrate - 0.7976 79.76%
CYP3A4 substrate + 0.6141 61.41%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8868 88.68%
CYP3A4 inhibition - 0.5333 53.33%
CYP2C9 inhibition - 0.8898 88.98%
CYP2C19 inhibition - 0.8462 84.62%
CYP2D6 inhibition - 0.9068 90.68%
CYP1A2 inhibition - 0.5000 50.00%
CYP2C8 inhibition - 0.6059 60.59%
CYP inhibitory promiscuity - 0.8710 87.10%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6654 66.54%
Eye corrosion - 0.9797 97.97%
Eye irritation - 0.8566 85.66%
Skin irritation - 0.5995 59.95%
Skin corrosion - 0.9405 94.05%
Ames mutagenesis - 0.5691 56.91%
Human Ether-a-go-go-Related Gene inhibition - 0.4567 45.67%
Micronuclear - 0.8800 88.00%
Hepatotoxicity + 0.5791 57.91%
skin sensitisation - 0.8856 88.56%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.6000 60.00%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.8024 80.24%
Acute Oral Toxicity (c) III 0.5182 51.82%
Estrogen receptor binding - 0.5738 57.38%
Androgen receptor binding + 0.5337 53.37%
Thyroid receptor binding - 0.5417 54.17%
Glucocorticoid receptor binding + 0.5732 57.32%
Aromatase binding - 0.5298 52.98%
PPAR gamma + 0.6248 62.48%
Honey bee toxicity - 0.7699 76.99%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9838 98.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.38% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.91% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.15% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 89.56% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.10% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.07% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.04% 99.23%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.21% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.32% 94.45%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.44% 95.50%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 81.32% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.65% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ageratina riparia
Eupatorium cannabinum
Eupatorium fortunei
Eupatorium glehnii

Cross-Links

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PubChem 24838342
NPASS NPC46814