D-Streptamine, O-4-amino-4-deoxy-alpha-D-glucopyranosyl-(1-8)-O-(8R)-2-amino-2,3,7-trideoxy-7-(methylamino)-D-glycero-alpha-D-allo-octadialdo-1,5:8,4-dipyranosyl-(1-4)-2-deoxy-

Details

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Internal ID 80d31c71-1585-4c0c-a48c-35b1e6680e26
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides > Aminocyclitol glycosides
IUPAC Name (2R,3R,4S,5S,6S)-2-[[(2R,3S,4R,4aR,7R,8aS)-7-amino-6-[(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl]oxy-4-hydroxy-3-(methylamino)-2,3,4,4a,6,7,8,8a-octahydropyrano[3,2-b]pyran-2-yl]oxy]-5-amino-6-(hydroxymethyl)oxane-3,4-diol
SMILES (Canonical) CNC1C(C2C(CC(C(O2)OC3C(CC(C(C3O)O)N)N)N)OC1OC4C(C(C(C(O4)CO)N)O)O)O
SMILES (Isomeric) CN[C@H]1[C@H]([C@@H]2[C@H](C[C@H](C(O2)O[C@@H]3[C@H](C[C@H]([C@@H]([C@H]3O)O)N)N)N)O[C@@H]1O[C@@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)N)O)O)O
InChI InChI=1S/C21H41N5O11/c1-26-11-14(30)18-8(33-20(11)37-21-16(32)13(29)10(25)9(4-27)34-21)3-7(24)19(36-18)35-17-6(23)2-5(22)12(28)15(17)31/h5-21,26-32H,2-4,22-25H2,1H3/t5-,6+,7-,8+,9-,10-,11+,12+,13+,14-,15-,16-,17-,18+,19?,20-,21-/m1/s1
InChI Key XZNUGFQTQHRASN-XZEBHBPDSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C21H41N5O11
Molecular Weight 539.60 g/mol
Exact Mass 539.28025714 g/mol
Topological Polar Surface Area (TPSA) 284.00 Ų
XlogP -7.00
Atomic LogP (AlogP) -6.95
H-Bond Acceptor 16
H-Bond Donor 11
Rotatable Bonds 6

Synonyms

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(2R,3R,4S,5S,6S)-2-[[(2R,3S,4R,4aR,7R,8aS)-7-amino-6-[(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxy-cyclohexoxy]-4-hydroxy-3-(methylamino)-2,3,4,4a,6,7,8,8a-octahydropyrano[3,2-b]pyran-2-yl]oxy]-5-amino-6-(hydroxymethyl)tetrahydropyran-3,4-diol

2D Structure

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2D Structure of D-Streptamine, O-4-amino-4-deoxy-alpha-D-glucopyranosyl-(1-8)-O-(8R)-2-amino-2,3,7-trideoxy-7-(methylamino)-D-glycero-alpha-D-allo-octadialdo-1,5:8,4-dipyranosyl-(1-4)-2-deoxy-

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9361 93.61%
Caco-2 - 0.8911 89.11%
Blood Brain Barrier - 0.9750 97.50%
Human oral bioavailability - 0.9143 91.43%
Subcellular localzation Lysosomes 0.4869 48.69%
OATP2B1 inhibitior - 0.8640 86.40%
OATP1B1 inhibitior + 0.9267 92.67%
OATP1B3 inhibitior + 0.9525 95.25%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.9078 90.78%
P-glycoprotein inhibitior - 0.7668 76.68%
P-glycoprotein substrate - 0.6962 69.62%
CYP3A4 substrate + 0.6269 62.69%
CYP2C9 substrate - 0.7952 79.52%
CYP2D6 substrate - 0.7329 73.29%
CYP3A4 inhibition - 0.9234 92.34%
CYP2C9 inhibition - 0.9196 91.96%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition + 0.4615 46.15%
CYP inhibitory promiscuity - 0.8708 87.08%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6360 63.60%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9572 95.72%
Skin irritation - 0.8145 81.45%
Skin corrosion - 0.9368 93.68%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7277 72.77%
Micronuclear + 0.7700 77.00%
Hepatotoxicity + 0.5479 54.79%
skin sensitisation - 0.8904 89.04%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity + 0.6756 67.56%
Acute Oral Toxicity (c) III 0.4674 46.74%
Estrogen receptor binding - 0.5000 50.00%
Androgen receptor binding - 0.6598 65.98%
Thyroid receptor binding + 0.5474 54.74%
Glucocorticoid receptor binding + 0.5936 59.36%
Aromatase binding + 0.5579 55.79%
PPAR gamma + 0.6458 64.58%
Honey bee toxicity - 0.7006 70.06%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.9782 97.82%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.78% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.64% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.47% 97.09%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 94.38% 95.58%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.94% 96.21%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.92% 85.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.72% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.47% 94.45%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 86.03% 95.83%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.59% 86.92%
CHEMBL2996 Q05655 Protein kinase C delta 82.27% 97.79%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.04% 97.25%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.03% 94.33%
CHEMBL4581 P52732 Kinesin-like protein 1 81.96% 93.18%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.53% 95.50%
CHEMBL226 P30542 Adenosine A1 receptor 81.04% 95.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.57% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 71428
LOTUS LTS0241207
wikiData Q104246754