Geleganidine A

Details

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Internal ID 11b4815b-ec87-4452-ad23-c07051e93ea8
Taxonomy Alkaloids and derivatives > Gelsemium alkaloids
IUPAC Name (1R,2S,4S,7Z,8R,9S)-7-ethylidene-1',6'-dimethoxy-2'-oxospiro[11-oxa-5-azatricyclo[6.3.1.04,9]dodecane-2,3'-indole]-5-carbaldehyde
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C22H26N2O5/c1-4-13-10-23(12-25)19-9-22(20-8-15(13)16(19)11-29-20)17-6-5-14(27-2)7-18(17)24(28-3)21(22)26/h4-7,12,15-16,19-20H,8-11H2,1-3H3/b13-4+/t15-,16-,19-,20+,22-/m0/s1
InChI Key CVZRLVRONXDZMM-JNIIIHBOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C22H26N2O5
Molecular Weight 398.50 g/mol
Exact Mass 398.18417193 g/mol
Topological Polar Surface Area (TPSA) 68.30 Ų
XlogP 1.20
Atomic LogP (AlogP) 2.05
H-Bond Acceptor 5
H-Bond Donor 0
Rotatable Bonds 3

Synonyms

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RefChem:922142
(1R,2S,4S,7Z,8R,9S)-7-ethylidene-1',6'-dimethoxy-2'-oxospiro(11-oxa-5-azatricyclo(6.3.1.04,9)dodecane-2,3'-indole)-5-carbaldehyde
CHEMBL3597660

2D Structure

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2D Structure of Geleganidine A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9754 97.54%
Caco-2 + 0.7083 70.83%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.5008 50.08%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8513 85.13%
OATP1B3 inhibitior + 0.9344 93.44%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.9232 92.32%
P-glycoprotein inhibitior + 0.8458 84.58%
P-glycoprotein substrate + 0.5785 57.85%
CYP3A4 substrate + 0.6900 69.00%
CYP2C9 substrate - 0.6019 60.19%
CYP2D6 substrate - 0.7641 76.41%
CYP3A4 inhibition - 0.6447 64.47%
CYP2C9 inhibition - 0.6598 65.98%
CYP2C19 inhibition - 0.6403 64.03%
CYP2D6 inhibition - 0.9009 90.09%
CYP1A2 inhibition - 0.7853 78.53%
CYP2C8 inhibition + 0.5212 52.12%
CYP inhibitory promiscuity - 0.7742 77.42%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7900 79.00%
Carcinogenicity (trinary) Non-required 0.4745 47.45%
Eye corrosion - 0.9816 98.16%
Eye irritation - 0.9804 98.04%
Skin irritation - 0.7738 77.38%
Skin corrosion - 0.9293 92.93%
Ames mutagenesis + 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7447 74.47%
Micronuclear + 0.6600 66.00%
Hepatotoxicity - 0.5539 55.39%
skin sensitisation - 0.8412 84.12%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.6492 64.92%
Acute Oral Toxicity (c) III 0.6156 61.56%
Estrogen receptor binding + 0.7836 78.36%
Androgen receptor binding + 0.7062 70.62%
Thyroid receptor binding + 0.5286 52.86%
Glucocorticoid receptor binding + 0.7316 73.16%
Aromatase binding - 0.5000 50.00%
PPAR gamma - 0.5250 52.50%
Honey bee toxicity - 0.7499 74.99%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.7000 70.00%
Fish aquatic toxicity + 0.9758 97.58%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5697 Q9GZT9 Egl nine homolog 1 98.65% 93.40%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.34% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.27% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.15% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.91% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.15% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.27% 86.33%
CHEMBL4208 P20618 Proteasome component C5 89.03% 90.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.17% 94.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 87.87% 97.14%
CHEMBL2581 P07339 Cathepsin D 87.84% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.63% 92.94%
CHEMBL4940 P07195 L-lactate dehydrogenase B chain 84.59% 95.53%
CHEMBL4588 P22894 Matrix metalloproteinase 8 81.34% 94.66%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.97% 91.07%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.85% 90.71%
CHEMBL340 P08684 Cytochrome P450 3A4 80.49% 91.19%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.11% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gelsemium elegans

Cross-Links

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PubChem 122183789
LOTUS LTS0248776
wikiData Q104971108