2'-Monophosphoadenosine-5'-Diphosphate

Details

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Internal ID b7e19538-c159-411e-bc5a-69a78627a540
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleotides > Purine ribonucleotides > Purine ribonucleoside diphosphates
IUPAC Name [(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-4-phosphonooxyoxolan-2-yl]methyl phosphono hydrogen phosphate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(27-29(17,18)19)6(16)4(26-10)1-25-31(23,24)28-30(20,21)22/h2-4,6-7,10,16H,1H2,(H,23,24)(H2,11,12,13)(H2,17,18,19)(H2,20,21,22)/t4-,6-,7-,10-/m1/s1
InChI Key YPTPYQSAVGGMFN-KQYNXXCUSA-N
Popularity 32 references in papers

Physical and Chemical Properties

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Molecular Formula C10H16N5O13P3
Molecular Weight 507.18 g/mol
Exact Mass 506.99574658 g/mol
Topological Polar Surface Area (TPSA) 279.00 Ų
XlogP -5.70
Atomic LogP (AlogP) -1.63
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-4-phosphonooxyoxolan-2-yl]methyl phosphono hydrogen phosphate
(((2R,3R,4R,5R)-2-(6-amino-9H-purin-9-yl)-4-hydroxy-5-(((hydroxy(phosphonooxy)phosphoryl)oxy)methyl)oxolan-3-yl)oxy)phosphonic acid
((2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-hydroxy-4-phosphonooxyoxolan-2-yl)methyl phosphono hydrogen phosphate
{[(2R,3R,4R,5R)-2-(6-amino-9H-purin-9-yl)-4-hydroxy-5-({[hydroxy(phosphonooxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid
RefChem:439719
4457-01-6
2'-phosphoadenosine diphosphate
adenosine 2'-(dihydrogen phosphate) 5'-(trihydrogen diphosphate)
2-Phospho-adenosine diphosphate
1afl
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 2'-Monophosphoadenosine-5'-Diphosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5932 59.32%
Caco-2 - 0.8762 87.62%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.3417 34.17%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9463 94.63%
OATP1B3 inhibitior + 0.9439 94.39%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.7584 75.84%
P-glycoprotein inhibitior - 0.5660 56.60%
P-glycoprotein substrate - 0.6895 68.95%
CYP3A4 substrate + 0.5654 56.54%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8633 86.33%
CYP3A4 inhibition - 0.9264 92.64%
CYP2C9 inhibition - 0.9170 91.70%
CYP2C19 inhibition - 0.9184 91.84%
CYP2D6 inhibition - 0.8846 88.46%
CYP1A2 inhibition - 0.8970 89.70%
CYP2C8 inhibition - 0.6166 61.66%
CYP inhibitory promiscuity - 0.9642 96.42%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5676 56.76%
Eye corrosion - 0.9876 98.76%
Eye irritation - 0.9491 94.91%
Skin irritation - 0.7626 76.26%
Skin corrosion - 0.9269 92.69%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5812 58.12%
Micronuclear + 1.0000 100.00%
Hepatotoxicity - 0.5484 54.84%
skin sensitisation - 0.8501 85.01%
Respiratory toxicity + 0.9444 94.44%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.6826 68.26%
Acute Oral Toxicity (c) III 0.6382 63.82%
Estrogen receptor binding + 0.7191 71.91%
Androgen receptor binding + 0.5294 52.94%
Thyroid receptor binding + 0.6256 62.56%
Glucocorticoid receptor binding - 0.5602 56.02%
Aromatase binding + 0.7013 70.13%
PPAR gamma + 0.6534 65.34%
Honey bee toxicity - 0.7372 73.72%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5550 55.50%
Fish aquatic toxicity - 0.6654 66.54%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.28% 96.09%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 98.26% 80.33%
CHEMBL4040 P28482 MAP kinase ERK2 94.91% 83.82%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 91.02% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 90.15% 94.73%
CHEMBL2243 O00519 Anandamide amidohydrolase 87.85% 97.53%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.51% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.57% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.30% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.90% 86.33%
CHEMBL2094108 P49354 Protein farnesyltransferase 82.66% 97.92%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.25% 99.23%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 81.89% 95.48%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.69% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 81.51% 91.11%
CHEMBL3891 P07384 Calpain 1 81.07% 93.04%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 80.81% 93.65%
CHEMBL226 P30542 Adenosine A1 receptor 80.50% 95.93%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 80.41% 96.67%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 165230
LOTUS LTS0120382
wikiData Q82945073