2-Methylthio-N-6-isopentenyladenosine

Details

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Internal ID f1f14dc2-bf42-4dab-bee8-53f3ae5e3d8d
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleosides
IUPAC Name (2R,3S,4R,5R)-2-(hydroxymethyl)-5-[6-(3-methylbut-2-enylamino)-2-methylsulfanylpurin-9-yl]oxolane-3,4-diol
SMILES (Canonical) CC(=CCNC1=C2C(=NC(=N1)SC)N(C=N2)C3C(C(C(O3)CO)O)O)C
SMILES (Isomeric) CC(=CCNC1=C2C(=NC(=N1)SC)N(C=N2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)C
InChI InChI=1S/C16H23N5O4S/c1-8(2)4-5-17-13-10-14(20-16(19-13)26-3)21(7-18-10)15-12(24)11(23)9(6-22)25-15/h4,7,9,11-12,15,22-24H,5-6H2,1-3H3,(H,17,19,20)/t9-,11-,12-,15-/m1/s1
InChI Key VZQXUWKZDSEQRR-SDBHATRESA-N
Popularity 20 references in papers

Physical and Chemical Properties

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Molecular Formula C16H23N5O4S
Molecular Weight 381.50 g/mol
Exact Mass 381.14707541 g/mol
Topological Polar Surface Area (TPSA) 151.00 Ų
XlogP 2.00
Atomic LogP (AlogP) 0.54
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 6

Synonyms

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ms2i6A
2-Methylthio-N-6-isopentenyladenosine
2-Mtia
Adenosine, N-(3-methyl-2-butenyl)-2-(methylthio)-
2MSA
(2R,3S,4R,5R)-2-(Hydroxymethyl)-5-(6-((3-methylbut-2-en-1-yl)amino)-2-(methylthio)-9H-purin-9-yl)tetrahydrofuran-3,4-diol
2-Methyl-thio-N-6-isopentyladenosine
2-Methylthio-N(6)-isopentenyladenosine
2-methylthio-N(6)-(Delta(2)-isopentenyl)adenosine
N(6)-(delta(2)-Isopentenyl)-2-methylthioadenosine
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 2-Methylthio-N-6-isopentenyladenosine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7018 70.18%
Caco-2 - 0.8688 86.88%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Lysosomes 0.3640 36.40%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9095 90.95%
OATP1B3 inhibitior + 0.9386 93.86%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9203 92.03%
P-glycoprotein inhibitior - 0.7364 73.64%
P-glycoprotein substrate - 0.7152 71.52%
CYP3A4 substrate + 0.5506 55.06%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8562 85.62%
CYP3A4 inhibition - 0.9453 94.53%
CYP2C9 inhibition - 0.7916 79.16%
CYP2C19 inhibition - 0.7724 77.24%
CYP2D6 inhibition - 0.8857 88.57%
CYP1A2 inhibition - 0.7818 78.18%
CYP2C8 inhibition - 0.7660 76.60%
CYP inhibitory promiscuity - 0.8471 84.71%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5100 51.00%
Eye corrosion - 0.9821 98.21%
Eye irritation - 0.9653 96.53%
Skin irritation - 0.7468 74.68%
Skin corrosion - 0.9175 91.75%
Ames mutagenesis + 0.5330 53.30%
Human Ether-a-go-go-Related Gene inhibition - 0.6063 60.63%
Micronuclear + 0.9200 92.00%
Hepatotoxicity - 0.6154 61.54%
skin sensitisation - 0.8280 82.80%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity + 0.6834 68.34%
Acute Oral Toxicity (c) III 0.6010 60.10%
Estrogen receptor binding + 0.8829 88.29%
Androgen receptor binding + 0.6514 65.14%
Thyroid receptor binding + 0.7357 73.57%
Glucocorticoid receptor binding - 0.4637 46.37%
Aromatase binding + 0.8122 81.22%
PPAR gamma + 0.7062 70.62%
Honey bee toxicity - 0.7602 76.02%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7700 77.00%
Fish aquatic toxicity + 0.7398 73.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL226 P30542 Adenosine A1 receptor 97.16% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 94.18% 94.73%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 93.41% 93.10%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.60% 96.09%
CHEMBL3038469 P24941 CDK2/Cyclin A 91.40% 91.38%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 90.92% 80.33%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 88.85% 95.83%
CHEMBL3589 P55263 Adenosine kinase 88.72% 98.05%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.96% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.69% 94.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.16% 99.17%
CHEMBL4040 P28482 MAP kinase ERK2 86.06% 83.82%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.38% 96.90%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.32% 99.23%
CHEMBL308 P06493 Cyclin-dependent kinase 1 82.27% 91.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.88% 86.33%
CHEMBL1827 O76074 Phosphodiesterase 5A 80.62% 99.55%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ginkgo biloba

Cross-Links

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PubChem 161337
NPASS NPC222743
LOTUS LTS0103340
wikiData Q27132248