rhodomyrtoxin B

Details

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Internal ID 61c839ff-34d1-42fe-a3f2-f07b1bd856ca
Taxonomy Organoheterocyclic compounds > Benzofurans > Dibenzofurans
IUPAC Name 2-methyl-1-[1,3,7,9-tetrahydroxy-4,6-dimethyl-8-(2-methylbutanoyl)dibenzofuran-2-yl]butan-1-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C24H28O7/c1-7-9(3)17(25)15-19(27)11(5)23-13(21(15)29)14-22(30)16(18(26)10(4)8-2)20(28)12(6)24(14)31-23/h9-10,27-30H,7-8H2,1-6H3
InChI Key SGFCERQKVVMREN-UHFFFAOYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C24H28O7
Molecular Weight 428.50 g/mol
Exact Mass 428.18350323 g/mol
Topological Polar Surface Area (TPSA) 128.00 Ų
XlogP 6.20
Atomic LogP (AlogP) 5.48
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 6

Synonyms

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2-methyl-1-[1,3,7,9-tetrahydroxy-4,6-dimethyl-8-(2-methyl-1-oxobutyl)-2-dibenzofuranyl]-1-butanone
KBio2_007472
Spectrum_001834
SpecPlus_000368
Spectrum2_001651
Spectrum3_001619
Spectrum4_001671
Spectrum5_000601
BSPBio_003257
KBioGR_002221
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of rhodomyrtoxin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9794 97.94%
Caco-2 - 0.5368 53.68%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.6699 66.99%
OATP2B1 inhibitior - 0.5658 56.58%
OATP1B1 inhibitior - 0.7739 77.39%
OATP1B3 inhibitior + 0.8715 87.15%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.7540 75.40%
P-glycoprotein inhibitior - 0.6281 62.81%
P-glycoprotein substrate - 0.8579 85.79%
CYP3A4 substrate - 0.6049 60.49%
CYP2C9 substrate + 0.6351 63.51%
CYP2D6 substrate - 0.8197 81.97%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition + 0.7710 77.10%
CYP2C19 inhibition - 0.5174 51.74%
CYP2D6 inhibition - 0.8757 87.57%
CYP1A2 inhibition + 0.9176 91.76%
CYP2C8 inhibition - 0.8763 87.63%
CYP inhibitory promiscuity + 0.7580 75.80%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9043 90.43%
Carcinogenicity (trinary) Non-required 0.5166 51.66%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.6391 63.91%
Skin irritation - 0.7502 75.02%
Skin corrosion - 0.9219 92.19%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5912 59.12%
Micronuclear + 0.6500 65.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.7761 77.61%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.6000 60.00%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.8928 89.28%
Acute Oral Toxicity (c) III 0.5117 51.17%
Estrogen receptor binding + 0.6832 68.32%
Androgen receptor binding + 0.5759 57.59%
Thyroid receptor binding + 0.5346 53.46%
Glucocorticoid receptor binding + 0.6942 69.42%
Aromatase binding + 0.5585 55.85%
PPAR gamma + 0.7256 72.56%
Honey bee toxicity - 0.9577 95.77%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity + 0.9929 99.29%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL4040 P28482 MAP kinase ERK2 125.9 nM
Potency
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 92.48% 98.95%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 90.33% 83.57%
CHEMBL3401 O75469 Pregnane X receptor 88.26% 94.73%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 87.94% 89.34%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.32% 91.11%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 86.53% 93.65%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.38% 94.45%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 83.89% 100.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 83.06% 97.21%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.91% 93.56%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.39% 90.71%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 82.30% 98.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.84% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.12% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhodomyrtus macrocarpa

Cross-Links

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PubChem 3270699
LOTUS LTS0015383
wikiData Q27163344