2-(Hydroxymethyl)-6-[(5-hydroxy-3,4,6-trimethoxy-9,10-dihydrophenanthren-2-yl)oxy]oxane-3,4,5-triol

Details

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Internal ID 1cd682c9-9398-4901-b603-2ca68c7ab292
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name 2-(hydroxymethyl)-6-[(5-hydroxy-3,4,6-trimethoxy-9,10-dihydrophenanthren-2-yl)oxy]oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H28O10/c1-29-12-7-6-10-4-5-11-8-13(21(30-2)22(31-3)16(11)15(10)17(12)25)32-23-20(28)19(27)18(26)14(9-24)33-23/h6-8,14,18-20,23-28H,4-5,9H2,1-3H3
InChI Key GBELCHPDFBQBDG-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C23H28O10
Molecular Weight 464.50 g/mol
Exact Mass 464.16824709 g/mol
Topological Polar Surface Area (TPSA) 147.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 0.36
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-(Hydroxymethyl)-6-[(5-hydroxy-3,4,6-trimethoxy-9,10-dihydrophenanthren-2-yl)oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6551 65.51%
Caco-2 - 0.7453 74.53%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.5886 58.86%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8785 87.85%
OATP1B3 inhibitior + 0.9442 94.42%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.6765 67.65%
P-glycoprotein inhibitior - 0.6608 66.08%
P-glycoprotein substrate - 0.7529 75.29%
CYP3A4 substrate + 0.6155 61.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7447 74.47%
CYP3A4 inhibition - 0.9362 93.62%
CYP2C9 inhibition - 0.8162 81.62%
CYP2C19 inhibition - 0.8392 83.92%
CYP2D6 inhibition - 0.8989 89.89%
CYP1A2 inhibition - 0.6434 64.34%
CYP2C8 inhibition + 0.6247 62.47%
CYP inhibitory promiscuity - 0.7808 78.08%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.7164 71.64%
Eye corrosion - 0.9886 98.86%
Eye irritation - 0.9430 94.30%
Skin irritation - 0.8335 83.35%
Skin corrosion - 0.9542 95.42%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5075 50.75%
Micronuclear - 0.6241 62.41%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.9094 90.94%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.7595 75.95%
Acute Oral Toxicity (c) III 0.6991 69.91%
Estrogen receptor binding + 0.8196 81.96%
Androgen receptor binding - 0.5188 51.88%
Thyroid receptor binding + 0.6150 61.50%
Glucocorticoid receptor binding + 0.5881 58.81%
Aromatase binding + 0.6447 64.47%
PPAR gamma + 0.7303 73.03%
Honey bee toxicity - 0.9158 91.58%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6349 63.49%
Fish aquatic toxicity - 0.4444 44.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.14% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.23% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.65% 86.33%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.24% 96.21%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.08% 99.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.79% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.36% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.10% 95.89%
CHEMBL1951 P21397 Monoamine oxidase A 88.44% 91.49%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.05% 97.09%
CHEMBL4208 P20618 Proteasome component C5 85.46% 90.00%
CHEMBL220 P22303 Acetylcholinesterase 85.40% 94.45%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.94% 94.45%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 84.52% 89.62%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.25% 95.56%
CHEMBL2581 P07339 Cathepsin D 82.83% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.81% 89.00%
CHEMBL4581 P52732 Kinesin-like protein 1 82.07% 93.18%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.25% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Epimedium grandiflorum

Cross-Links

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PubChem 14135379
LOTUS LTS0029999
wikiData Q105005808