2-deoxy-D-ribitol

Details

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Internal ID 8cd4643a-c636-4c80-87f3-8b2e3aae354b
Taxonomy Organic oxygen compounds > Organooxygen compounds > Alcohols and polyols > Secondary alcohols
IUPAC Name pentane-1,2,3,5-tetrol
SMILES (Canonical) C(CO)C(C(CO)O)O
SMILES (Isomeric) C(CO)C(C(CO)O)O
InChI InChI=1S/C5H12O4/c6-2-1-4(8)5(9)3-7/h4-9H,1-3H2
InChI Key ZDAWZDFBPUUDAY-UHFFFAOYSA-N
Popularity 20 references in papers

Physical and Chemical Properties

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Molecular Formula C5H12O4
Molecular Weight 136.15 g/mol
Exact Mass 136.07355886 g/mol
Topological Polar Surface Area (TPSA) 80.90 Ų
XlogP -2.00
Atomic LogP (AlogP) -1.92
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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pentane-1,2,3,5-tetrol
2-deoxypentitol
13942-76-2
2-deoxy-xylulose
NSC67660
SCHEMBL346604
DTXSID30930467
CHEBI:166493
NSC-67660

2D Structure

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2D Structure of 2-deoxy-D-ribitol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6273 62.73%
Caco-2 - 0.9257 92.57%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6937 69.37%
OATP2B1 inhibitior - 0.8499 84.99%
OATP1B1 inhibitior + 0.9645 96.45%
OATP1B3 inhibitior + 0.9515 95.15%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.9615 96.15%
P-glycoprotein inhibitior - 0.9859 98.59%
P-glycoprotein substrate - 0.9623 96.23%
CYP3A4 substrate - 0.7803 78.03%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7068 70.68%
CYP3A4 inhibition - 0.9564 95.64%
CYP2C9 inhibition - 0.8909 89.09%
CYP2C19 inhibition - 0.9070 90.70%
CYP2D6 inhibition - 0.9321 93.21%
CYP1A2 inhibition - 0.8293 82.93%
CYP2C8 inhibition - 0.9964 99.64%
CYP inhibitory promiscuity - 0.9669 96.69%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8300 83.00%
Carcinogenicity (trinary) Non-required 0.7054 70.54%
Eye corrosion - 0.9621 96.21%
Eye irritation + 0.6149 61.49%
Skin irritation - 0.8176 81.76%
Skin corrosion - 0.9873 98.73%
Ames mutagenesis - 0.9378 93.78%
Human Ether-a-go-go-Related Gene inhibition - 0.5973 59.73%
Micronuclear - 1.0000 100.00%
Hepatotoxicity - 0.7787 77.87%
skin sensitisation - 0.8758 87.58%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity - 0.9556 95.56%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.5775 57.75%
Acute Oral Toxicity (c) IV 0.7112 71.12%
Estrogen receptor binding - 0.9168 91.68%
Androgen receptor binding - 0.8667 86.67%
Thyroid receptor binding - 0.7974 79.74%
Glucocorticoid receptor binding - 0.8079 80.79%
Aromatase binding - 0.8673 86.73%
PPAR gamma - 0.9042 90.42%
Honey bee toxicity - 0.9109 91.09%
Biodegradation + 0.9250 92.50%
Crustacea aquatic toxicity - 0.9400 94.00%
Fish aquatic toxicity - 0.9256 92.56%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.89% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 87.86% 83.82%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.20% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glehnia littoralis

Cross-Links

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PubChem 249377
LOTUS LTS0261880
wikiData Q82905836