methyl (1S,4aS,7aS)-7-methylidene-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate

Details

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Internal ID c2f1ec72-f7a8-4c4e-b726-de2004f2b973
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name methyl (1S,4aS,7aS)-7-methylidene-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) CC1C(C(C(C(O1)OCC2C(C(C(C(O2)OC3C4C(CCC4=C)C(=CO3)C(=O)OC)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]([C@H]([C@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)O[C@H]3[C@H]4[C@H](CCC4=C)C(=CO3)C(=O)OC)O)O)O)O)O)O
InChI InChI=1S/C23H34O13/c1-8-4-5-10-11(20(30)31-3)6-32-21(13(8)10)36-23-19(29)17(27)15(25)12(35-23)7-33-22-18(28)16(26)14(24)9(2)34-22/h6,9-10,12-19,21-29H,1,4-5,7H2,2-3H3/t9-,10+,12+,13+,14+,15+,16+,17-,18+,19+,21-,22+,23-/m0/s1
InChI Key LOPVRRKXBOZTKE-KVQLXEMKSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C23H34O13
Molecular Weight 518.50 g/mol
Exact Mass 518.19994113 g/mol
Topological Polar Surface Area (TPSA) 194.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -2.35
H-Bond Acceptor 13
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,4aS,7aS)-7-methylidene-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5476 54.76%
Caco-2 - 0.8622 86.22%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7678 76.78%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8072 80.72%
OATP1B3 inhibitior + 0.9429 94.29%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.7347 73.47%
P-glycoprotein inhibitior - 0.7241 72.41%
P-glycoprotein substrate - 0.6559 65.59%
CYP3A4 substrate + 0.6431 64.31%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8693 86.93%
CYP3A4 inhibition - 0.8420 84.20%
CYP2C9 inhibition - 0.8744 87.44%
CYP2C19 inhibition - 0.7964 79.64%
CYP2D6 inhibition - 0.8589 85.89%
CYP1A2 inhibition - 0.8436 84.36%
CYP2C8 inhibition + 0.4743 47.43%
CYP inhibitory promiscuity - 0.7256 72.56%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7125 71.25%
Eye corrosion - 0.9825 98.25%
Eye irritation - 0.9497 94.97%
Skin irritation - 0.7439 74.39%
Skin corrosion - 0.9410 94.10%
Ames mutagenesis - 0.6254 62.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6993 69.93%
Micronuclear - 0.7341 73.41%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.8480 84.80%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.6318 63.18%
Acute Oral Toxicity (c) III 0.4888 48.88%
Estrogen receptor binding + 0.6719 67.19%
Androgen receptor binding - 0.5236 52.36%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding + 0.5470 54.70%
PPAR gamma + 0.5370 53.70%
Honey bee toxicity - 0.8414 84.14%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.6823 68.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.91% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.75% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.35% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 86.19% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.33% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.06% 86.33%
CHEMBL221 P23219 Cyclooxygenase-1 84.68% 90.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.47% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.92% 95.89%
CHEMBL2581 P07339 Cathepsin D 83.58% 98.95%
CHEMBL5255 O00206 Toll-like receptor 4 83.56% 92.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.15% 89.00%
CHEMBL5028 O14672 ADAM10 81.54% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rehmannia glutinosa

Cross-Links

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PubChem 11968648
NPASS NPC197677