N-[1-[[5-[[1-[[1,3-dihydroxy-5-[[1-[[3-[(4-hydroxyphenyl)methyl]-4-methyl-2,5,8-trioxo-6-propan-2-yl-1-oxa-4,7-diazacyclododec-9-en-11-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1,3-dihydroxy-5-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]dec-3-enamide

Details

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Internal ID cd923a55-b7ab-4499-ae57-4feea610c4f5
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name N-[1-[[5-[[1-[[1,3-dihydroxy-5-[[1-[[3-[(4-hydroxyphenyl)methyl]-4-methyl-2,5,8-trioxo-6-propan-2-yl-1-oxa-4,7-diazacyclododec-9-en-11-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1,3-dihydroxy-5-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]dec-3-enamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C55H88N8O15/c1-11-12-13-14-15-16-17-18-43(69)59-48(32(4)5)52(74)57-38(28-64)42(68)27-46(72)62-49(33(6)7)53(75)58-39(29-65)41(67)26-45(71)61-47(31(2)3)51(73)56-36-21-24-44(70)60-50(34(8)9)54(76)63(10)40(55(77)78-30-36)25-35-19-22-37(66)23-20-35/h16-17,19-24,31-34,36,38-42,47-50,64-68H,11-15,18,25-30H2,1-10H3,(H,56,73)(H,57,74)(H,58,75)(H,59,69)(H,60,70)(H,61,71)(H,62,72)
InChI Key VJUFIBLXDHQEPE-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C55H88N8O15
Molecular Weight 1101.30 g/mol
Exact Mass 1100.63691413 g/mol
Topological Polar Surface Area (TPSA) 351.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 0.30
H-Bond Acceptor 15
H-Bond Donor 12
Rotatable Bonds 30

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of N-[1-[[5-[[1-[[1,3-dihydroxy-5-[[1-[[3-[(4-hydroxyphenyl)methyl]-4-methyl-2,5,8-trioxo-6-propan-2-yl-1-oxa-4,7-diazacyclododec-9-en-11-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1,3-dihydroxy-5-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]dec-3-enamide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7518 75.18%
Caco-2 - 0.8608 86.08%
Blood Brain Barrier - 0.9250 92.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.4675 46.75%
OATP2B1 inhibitior - 0.8585 85.85%
OATP1B1 inhibitior + 0.8025 80.25%
OATP1B3 inhibitior + 0.8837 88.37%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9555 95.55%
P-glycoprotein inhibitior + 0.7412 74.12%
P-glycoprotein substrate + 0.8558 85.58%
CYP3A4 substrate + 0.7259 72.59%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8731 87.31%
CYP3A4 inhibition + 0.8683 86.83%
CYP2C9 inhibition - 0.8877 88.77%
CYP2C19 inhibition - 0.8629 86.29%
CYP2D6 inhibition - 0.8895 88.95%
CYP1A2 inhibition - 0.9246 92.46%
CYP2C8 inhibition + 0.7490 74.90%
CYP inhibitory promiscuity - 0.9407 94.07%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.6134 61.34%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.8976 89.76%
Skin irritation - 0.7781 77.81%
Skin corrosion - 0.9249 92.49%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7146 71.46%
Micronuclear + 0.8400 84.00%
Hepatotoxicity - 0.6830 68.30%
skin sensitisation - 0.8691 86.91%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.6816 68.16%
Acute Oral Toxicity (c) III 0.6506 65.06%
Estrogen receptor binding + 0.7503 75.03%
Androgen receptor binding + 0.7285 72.85%
Thyroid receptor binding + 0.6336 63.36%
Glucocorticoid receptor binding + 0.7129 71.29%
Aromatase binding + 0.6171 61.71%
PPAR gamma + 0.8009 80.09%
Honey bee toxicity - 0.8067 80.67%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.6415 64.15%
Fish aquatic toxicity + 0.9219 92.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.98% 98.95%
CHEMBL5103 Q969S8 Histone deacetylase 10 98.94% 90.08%
CHEMBL3060 Q9Y345 Glycine transporter 2 98.68% 99.17%
CHEMBL3891 P07384 Calpain 1 97.76% 93.04%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.10% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.00% 96.09%
CHEMBL4588 P22894 Matrix metalloproteinase 8 96.03% 94.66%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.80% 94.45%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 93.85% 93.00%
CHEMBL4072 P07858 Cathepsin B 93.74% 93.67%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 93.62% 97.29%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 92.48% 89.67%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 91.57% 90.71%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 91.27% 92.86%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.72% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.64% 95.89%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 89.33% 93.10%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 88.32% 96.90%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 87.80% 92.08%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.79% 93.56%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 86.54% 100.00%
CHEMBL3776 Q14790 Caspase-8 86.00% 97.06%
CHEMBL3310 Q96DB2 Histone deacetylase 11 85.82% 88.56%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 85.69% 85.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.02% 97.25%
CHEMBL2514 O95665 Neurotensin receptor 2 84.80% 100.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.61% 95.50%
CHEMBL1781 P11387 DNA topoisomerase I 84.41% 97.00%
CHEMBL220 P22303 Acetylcholinesterase 83.80% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.74% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.73% 97.09%
CHEMBL4208 P20618 Proteasome component C5 81.79% 90.00%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 81.64% 96.37%
CHEMBL5261 Q7L7X3 Serine/threonine-protein kinase TAO1 81.36% 89.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.99% 100.00%
CHEMBL268 P43235 Cathepsin K 80.48% 96.85%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.31% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 78108953
LOTUS LTS0015851
wikiData Q104199524