(2R,3S,4R,5R,6S)-2-(hydroxymethyl)-6-[(7-methoxy-1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indol-8-yl)oxy]oxane-3,4,5-triol

Details

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Internal ID 0d98ef1d-a03b-4413-bdf4-b1ced38d9afb
Taxonomy Alkaloids and derivatives > Harmala alkaloids
IUPAC Name (2R,3S,4R,5R,6S)-2-(hydroxymethyl)-6-[(7-methoxy-1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indol-8-yl)oxy]oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C19H24N2O7/c1-8-13-10(5-6-20-8)9-3-4-11(26-2)18(14(9)21-13)28-19-17(25)16(24)15(23)12(7-22)27-19/h3-4,12,15-17,19,21-25H,5-7H2,1-2H3/t12-,15-,16-,17-,19+/m1/s1
InChI Key FJWRFZWSBCNWOG-HDFAOYPMSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C19H24N2O7
Molecular Weight 392.40 g/mol
Exact Mass 392.15835111 g/mol
Topological Polar Surface Area (TPSA) 137.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -0.28
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4R,5R,6S)-2-(hydroxymethyl)-6-[(7-methoxy-1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indol-8-yl)oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5385 53.85%
Caco-2 - 0.8358 83.58%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Nucleus 0.4530 45.30%
OATP2B1 inhibitior - 0.8591 85.91%
OATP1B1 inhibitior + 0.9388 93.88%
OATP1B3 inhibitior + 0.9357 93.57%
MATE1 inhibitior - 0.9012 90.12%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.6739 67.39%
P-glycoprotein inhibitior - 0.8341 83.41%
P-glycoprotein substrate - 0.6991 69.91%
CYP3A4 substrate + 0.6396 63.96%
CYP2C9 substrate - 0.7987 79.87%
CYP2D6 substrate - 0.8383 83.83%
CYP3A4 inhibition - 0.9287 92.87%
CYP2C9 inhibition - 0.8177 81.77%
CYP2C19 inhibition - 0.7817 78.17%
CYP2D6 inhibition - 0.7006 70.06%
CYP1A2 inhibition - 0.7064 70.64%
CYP2C8 inhibition + 0.5898 58.98%
CYP inhibitory promiscuity - 0.5868 58.68%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6652 66.52%
Eye corrosion - 0.9877 98.77%
Eye irritation - 0.9832 98.32%
Skin irritation - 0.7713 77.13%
Skin corrosion - 0.9303 93.03%
Ames mutagenesis - 0.7070 70.70%
Human Ether-a-go-go-Related Gene inhibition - 0.4748 47.48%
Micronuclear + 0.6100 61.00%
Hepatotoxicity - 0.7029 70.29%
skin sensitisation - 0.8477 84.77%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.8695 86.95%
Acute Oral Toxicity (c) III 0.6125 61.25%
Estrogen receptor binding + 0.5720 57.20%
Androgen receptor binding + 0.6229 62.29%
Thyroid receptor binding + 0.6492 64.92%
Glucocorticoid receptor binding + 0.6275 62.75%
Aromatase binding + 0.6020 60.20%
PPAR gamma + 0.6294 62.94%
Honey bee toxicity - 0.8671 86.71%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity - 0.7929 79.29%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.40% 96.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 95.09% 96.21%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.32% 94.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.63% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.94% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.44% 95.56%
CHEMBL4145 Q9UKV0 Histone deacetylase 9 89.65% 85.49%
CHEMBL2581 P07339 Cathepsin D 89.31% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.93% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.88% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.36% 94.45%
CHEMBL4302 P08183 P-glycoprotein 1 86.74% 92.98%
CHEMBL213 P08588 Beta-1 adrenergic receptor 85.23% 95.56%
CHEMBL2535 P11166 Glucose transporter 85.09% 98.75%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.95% 92.62%
CHEMBL5747 Q92793 CREB-binding protein 83.80% 95.12%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.86% 86.33%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.34% 89.62%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.20% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.00% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Peganum harmala

Cross-Links

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PubChem 163190288
LOTUS LTS0072487
wikiData Q104996382