(2S,3S,5S)-6-(hydroxymethyl)-2-[[(3S,5S,6R)-3,4,5,6-tetrahydroxy-6-[(3S,5S,6R)-5-hydroxy-6-[[(3S,10R,13R,14S,17S)-14-hydroxy-17-(1-hydroxyethyl)-10,13-dimethyl-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-4-methoxy-2-methyloxan-3-yl]oxyoxan-2-yl]methoxy]oxane-2,3,4,5-tetrol

Details

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Internal ID 8f84818a-54d6-4e8a-94f5-07439b8e778d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2S,3S,5S)-6-(hydroxymethyl)-2-[[(3S,5S,6R)-3,4,5,6-tetrahydroxy-6-[(3S,5S,6R)-5-hydroxy-6-[[(3S,10R,13R,14S,17S)-14-hydroxy-17-(1-hydroxyethyl)-10,13-dimethyl-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-4-methoxy-2-methyloxan-3-yl]oxyoxan-2-yl]methoxy]oxane-2,3,4,5-tetrol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C4CCC5(C(CCC5(C4CC=C3C2)O)C(C)O)C)C)O)OC)OC6(C(C(C(C(O6)COC7(C(C(C(C(O7)CO)O)O)O)O)O)O)O)O
SMILES (Isomeric) CC1[C@@H](C([C@@H]([C@@H](O1)O[C@H]2CC[C@@]3(C4CC[C@@]5([C@H](CC[C@@]5(C4CC=C3C2)O)C(C)O)C)C)O)OC)O[C@]6([C@H](C([C@@H](C(O6)CO[C@]7([C@H](C([C@@H](C(O7)CO)O)O)O)O)O)O)O)O
InChI InChI=1S/C40H66O19/c1-17(42)21-10-13-38(50)23-7-6-19-14-20(8-11-36(19,3)22(23)9-12-37(21,38)4)56-35-30(47)32(53-5)31(18(2)55-35)59-40(52)34(49)29(46)27(44)25(58-40)16-54-39(51)33(48)28(45)26(43)24(15-41)57-39/h6,17-18,20-35,41-52H,7-16H2,1-5H3/t17?,18?,20-,21+,22?,23?,24?,25?,26+,27+,28?,29?,30-,31-,32?,33-,34-,35-,36-,37+,38-,39-,40+/m0/s1
InChI Key FVYUMHYDEYGDON-UBZNGCPHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C40H66O19
Molecular Weight 850.90 g/mol
Exact Mass 850.41982987 g/mol
Topological Polar Surface Area (TPSA) 307.00 Ų
XlogP -2.90
Atomic LogP (AlogP) -2.78
H-Bond Acceptor 19
H-Bond Donor 12
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,5S)-6-(hydroxymethyl)-2-[[(3S,5S,6R)-3,4,5,6-tetrahydroxy-6-[(3S,5S,6R)-5-hydroxy-6-[[(3S,10R,13R,14S,17S)-14-hydroxy-17-(1-hydroxyethyl)-10,13-dimethyl-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-yl]oxy]-4-methoxy-2-methyloxan-3-yl]oxyoxan-2-yl]methoxy]oxane-2,3,4,5-tetrol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7715 77.15%
Caco-2 - 0.8856 88.56%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.6959 69.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8480 84.80%
OATP1B3 inhibitior + 0.8826 88.26%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.6516 65.16%
P-glycoprotein inhibitior + 0.7290 72.90%
P-glycoprotein substrate + 0.6924 69.24%
CYP3A4 substrate + 0.7230 72.30%
CYP2C9 substrate - 0.7968 79.68%
CYP2D6 substrate - 0.8472 84.72%
CYP3A4 inhibition - 0.9339 93.39%
CYP2C9 inhibition - 0.8944 89.44%
CYP2C19 inhibition - 0.8802 88.02%
CYP2D6 inhibition - 0.9332 93.32%
CYP1A2 inhibition - 0.8844 88.44%
CYP2C8 inhibition + 0.7154 71.54%
CYP inhibitory promiscuity - 0.9301 93.01%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5884 58.84%
Eye corrosion - 0.9871 98.71%
Eye irritation - 0.9121 91.21%
Skin irritation - 0.6300 63.00%
Skin corrosion - 0.9388 93.88%
Ames mutagenesis - 0.7354 73.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8062 80.62%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.6500 65.00%
skin sensitisation - 0.8977 89.77%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.9059 90.59%
Acute Oral Toxicity (c) I 0.3909 39.09%
Estrogen receptor binding + 0.8310 83.10%
Androgen receptor binding + 0.7720 77.20%
Thyroid receptor binding - 0.5462 54.62%
Glucocorticoid receptor binding + 0.6546 65.46%
Aromatase binding + 0.6551 65.51%
PPAR gamma + 0.7541 75.41%
Honey bee toxicity - 0.6794 67.94%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.8636 86.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.38% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 97.87% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.49% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.63% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 93.70% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.61% 97.25%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.70% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.23% 97.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.67% 95.89%
CHEMBL2996 Q05655 Protein kinase C delta 89.93% 97.79%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.20% 86.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.93% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.88% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.97% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.40% 97.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.20% 89.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.00% 91.07%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.10% 92.62%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 83.01% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.62% 93.04%
CHEMBL5028 O14672 ADAM10 82.30% 97.50%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.21% 96.21%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 80.12% 92.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 162817516
LOTUS LTS0090559
wikiData Q105105648