methyl (1R,4aR,7S,7aS)-1-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-methoxyoxan-2-yl]oxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate

Details

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Internal ID 5a228af1-62ff-4bd6-b10d-f9b10ed2cacc
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1R,4aR,7S,7aS)-1-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-methoxyoxan-2-yl]oxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) CC1CCC2C1C(OC=C2C(=O)OC)OC3C(C(C(C(O3)CO)O)O)OC
SMILES (Isomeric) C[C@H]1CC[C@@H]2[C@H]1[C@H](OC=C2C(=O)OC)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)OC
InChI InChI=1S/C18H28O9/c1-8-4-5-9-10(16(22)24-3)7-25-17(12(8)9)27-18-15(23-2)14(21)13(20)11(6-19)26-18/h7-9,11-15,17-21H,4-6H2,1-3H3/t8-,9-,11+,12-,13+,14-,15+,17+,18-/m0/s1
InChI Key VRJYCDHOFMCRRM-PWAOKHCYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C18H28O9
Molecular Weight 388.40 g/mol
Exact Mass 388.17333247 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP 0.50
Atomic LogP (AlogP) -0.47
H-Bond Acceptor 9
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1R,4aR,7S,7aS)-1-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-methoxyoxan-2-yl]oxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6701 67.01%
Caco-2 - 0.7152 71.52%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6992 69.92%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7397 73.97%
OATP1B3 inhibitior + 0.8982 89.82%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.8276 82.76%
P-glycoprotein inhibitior - 0.8116 81.16%
P-glycoprotein substrate - 0.7366 73.66%
CYP3A4 substrate + 0.6121 61.21%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8688 86.88%
CYP3A4 inhibition - 0.9266 92.66%
CYP2C9 inhibition - 0.8796 87.96%
CYP2C19 inhibition - 0.8865 88.65%
CYP2D6 inhibition - 0.9078 90.78%
CYP1A2 inhibition - 0.8172 81.72%
CYP2C8 inhibition - 0.6547 65.47%
CYP inhibitory promiscuity - 0.8321 83.21%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7026 70.26%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9727 97.27%
Skin irritation - 0.6689 66.89%
Skin corrosion - 0.9453 94.53%
Ames mutagenesis - 0.5924 59.24%
Human Ether-a-go-go-Related Gene inhibition - 0.4189 41.89%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.8989 89.89%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.6780 67.80%
Acute Oral Toxicity (c) III 0.5117 51.17%
Estrogen receptor binding + 0.5933 59.33%
Androgen receptor binding + 0.5499 54.99%
Thyroid receptor binding - 0.4901 49.01%
Glucocorticoid receptor binding - 0.6039 60.39%
Aromatase binding - 0.5663 56.63%
PPAR gamma - 0.6081 60.81%
Honey bee toxicity - 0.8892 88.92%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity + 0.7092 70.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.20% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.04% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 96.97% 83.82%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.62% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 90.20% 92.50%
CHEMBL2581 P07339 Cathepsin D 90.08% 98.95%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 86.51% 94.80%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.45% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.09% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 81.57% 94.73%
CHEMBL226 P30542 Adenosine A1 receptor 80.39% 95.93%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.03% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Nepeta grandiflora

Cross-Links

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PubChem 102121816
LOTUS LTS0106391
wikiData Q105291824