3-[[6-hydroxy-3-(3-methylbut-2-enyl)-2-oxo-1H-indol-3-yl]methyl]-2,3,6,7,8,8a-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione

Details

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Internal ID 2fa9482c-f0f3-4fbf-b96b-f7b50f8717f6
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name 3-[[6-hydroxy-3-(3-methylbut-2-enyl)-2-oxo-1H-indol-3-yl]methyl]-2,3,6,7,8,8a-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H25N3O4/c1-12(2)7-8-21(14-6-5-13(25)10-15(14)23-20(21)28)11-16-19(27)24-9-3-4-17(24)18(26)22-16/h5-7,10,16-17,25H,3-4,8-9,11H2,1-2H3,(H,22,26)(H,23,28)
InChI Key VKKSVIBSKZGZJM-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C21H25N3O4
Molecular Weight 383.40 g/mol
Exact Mass 383.18450629 g/mol
Topological Polar Surface Area (TPSA) 98.70 Ų
XlogP 1.80
Atomic LogP (AlogP) 1.82
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[[6-hydroxy-3-(3-methylbut-2-enyl)-2-oxo-1H-indol-3-yl]methyl]-2,3,6,7,8,8a-hexahydropyrrolo[1,2-a]pyrazine-1,4-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9641 96.41%
Caco-2 - 0.7262 72.62%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.8441 84.41%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7909 79.09%
OATP1B3 inhibitior + 0.9310 93.10%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8567 85.67%
BSEP inhibitior + 0.7263 72.63%
P-glycoprotein inhibitior - 0.6096 60.96%
P-glycoprotein substrate + 0.7386 73.86%
CYP3A4 substrate + 0.6351 63.51%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8031 80.31%
CYP3A4 inhibition - 0.8232 82.32%
CYP2C9 inhibition - 0.5721 57.21%
CYP2C19 inhibition - 0.6433 64.33%
CYP2D6 inhibition - 0.8309 83.09%
CYP1A2 inhibition - 0.8203 82.03%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity + 0.5498 54.98%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6408 64.08%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9899 98.99%
Skin irritation - 0.7738 77.38%
Skin corrosion - 0.9332 93.32%
Ames mutagenesis - 0.6654 66.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6371 63.71%
Micronuclear + 0.8200 82.00%
Hepatotoxicity + 0.6574 65.74%
skin sensitisation - 0.8480 84.80%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9750 97.50%
Nephrotoxicity + 0.6183 61.83%
Acute Oral Toxicity (c) III 0.6399 63.99%
Estrogen receptor binding + 0.6540 65.40%
Androgen receptor binding + 0.7171 71.71%
Thyroid receptor binding - 0.5166 51.66%
Glucocorticoid receptor binding + 0.7464 74.64%
Aromatase binding + 0.6007 60.07%
PPAR gamma + 0.5752 57.52%
Honey bee toxicity - 0.9024 90.24%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9776 97.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.97% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.11% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.50% 94.45%
CHEMBL1902 P62942 FK506-binding protein 1A 97.13% 97.05%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 96.76% 93.40%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.08% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.09% 96.09%
CHEMBL3524 P56524 Histone deacetylase 4 93.54% 92.97%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.17% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.37% 95.89%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 92.27% 82.38%
CHEMBL217 P14416 Dopamine D2 receptor 91.96% 95.62%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 90.94% 90.71%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.82% 92.94%
CHEMBL1937 Q92769 Histone deacetylase 2 89.49% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.58% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.51% 100.00%
CHEMBL4208 P20618 Proteasome component C5 86.39% 90.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 85.56% 93.03%
CHEMBL3038469 P24941 CDK2/Cyclin A 84.89% 91.38%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 84.57% 91.03%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.53% 86.33%
CHEMBL5103 Q969S8 Histone deacetylase 10 84.28% 90.08%
CHEMBL5203 P33316 dUTP pyrophosphatase 83.42% 99.18%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 83.20% 90.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.08% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 162867243
LOTUS LTS0268771
wikiData Q104199547