Methyl 7-(hydroxymethyl)-5-methoxy-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate

Details

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Internal ID e8ce08fd-b507-4c5a-9be5-8a4a0d43769a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl 7-(hydroxymethyl)-5-methoxy-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) COC1C=C(C2C1C(=COC2OC3C(C(C(C(O3)CO)O)O)O)C(=O)OC)CO
SMILES (Isomeric) COC1C=C(C2C1C(=COC2OC3C(C(C(C(O3)CO)O)O)O)C(=O)OC)CO
InChI InChI=1S/C18H26O11/c1-25-9-3-7(4-19)11-12(9)8(16(24)26-2)6-27-17(11)29-18-15(23)14(22)13(21)10(5-20)28-18/h3,6,9-15,17-23H,4-5H2,1-2H3
InChI Key XJZRHAMUBWIJEV-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C18H26O11
Molecular Weight 418.40 g/mol
Exact Mass 418.14751164 g/mol
Topological Polar Surface Area (TPSA) 164.00 Ų
XlogP -2.90
Atomic LogP (AlogP) -2.60
H-Bond Acceptor 11
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Methyl 7-(hydroxymethyl)-5-methoxy-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5351 53.51%
Caco-2 - 0.8430 84.30%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6797 67.97%
OATP2B1 inhibitior - 0.8624 86.24%
OATP1B1 inhibitior + 0.7716 77.16%
OATP1B3 inhibitior + 0.9612 96.12%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.8841 88.41%
P-glycoprotein inhibitior - 0.8277 82.77%
P-glycoprotein substrate - 0.7795 77.95%
CYP3A4 substrate + 0.5909 59.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8659 86.59%
CYP3A4 inhibition - 0.9318 93.18%
CYP2C9 inhibition - 0.9253 92.53%
CYP2C19 inhibition - 0.8513 85.13%
CYP2D6 inhibition - 0.9005 90.05%
CYP1A2 inhibition - 0.9152 91.52%
CYP2C8 inhibition - 0.6961 69.61%
CYP inhibitory promiscuity - 0.7190 71.90%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7025 70.25%
Eye corrosion - 0.9870 98.70%
Eye irritation - 0.9437 94.37%
Skin irritation - 0.8009 80.09%
Skin corrosion - 0.9580 95.80%
Ames mutagenesis + 0.5263 52.63%
Human Ether-a-go-go-Related Gene inhibition - 0.5205 52.05%
Micronuclear - 0.7041 70.41%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.8762 87.62%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.6570 65.70%
Acute Oral Toxicity (c) III 0.5093 50.93%
Estrogen receptor binding + 0.6366 63.66%
Androgen receptor binding - 0.5178 51.78%
Thyroid receptor binding - 0.5872 58.72%
Glucocorticoid receptor binding - 0.5675 56.75%
Aromatase binding - 0.5184 51.84%
PPAR gamma - 0.6141 61.41%
Honey bee toxicity - 0.8345 83.45%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.8100 81.00%
Fish aquatic toxicity - 0.5778 57.78%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.58% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.55% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 91.07% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.99% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.63% 86.92%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.27% 96.00%
CHEMBL2581 P07339 Cathepsin D 82.12% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides
Oldenlandia herbacea var. herbacea

Cross-Links

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PubChem 162848639
LOTUS LTS0253023
wikiData Q105329358