(3'S,5'R,7S,9S,13S,16S)-16-[(2R,3S,5R)-3,4-dihydroxy-5-[(2S,3S,5R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-6-(hydroxymethyl)oxan-2-yl]oxy-3'-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

Details

Top
Internal ID bd4eafdf-2996-4531-925b-93e2850a9c82
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (3'S,5'R,7S,9S,13S,16S)-16-[(2R,3S,5R)-3,4-dihydroxy-5-[(2S,3S,5R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-6-(hydroxymethyl)oxan-2-yl]oxy-3'-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C50H80O24/c1-18-9-31(56)50(66-16-18)19(2)32-26(74-50)11-24-22-6-5-20-10-21(7-8-48(20,3)23(22)12-30(55)49(24,32)4)67-45-40(64)37(61)41(29(15-53)70-45)71-47-43(73-46-39(63)36(60)34(58)27(13-51)68-46)42(35(59)28(14-52)69-47)72-44-38(62)33(57)25(54)17-65-44/h18-29,31-47,51-54,56-64H,5-17H2,1-4H3/t18-,19+,20?,21+,22?,23?,24?,25-,26?,27?,28?,29?,31+,32?,33?,34-,35-,36?,37?,38+,39+,40+,41+,42?,43+,44+,45-,46+,47+,48+,49-,50?/m1/s1
InChI Key IAVKEJWSSFYUBV-CFKPLKNDSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C50H80O24
Molecular Weight 1065.20 g/mol
Exact Mass 1064.50395341 g/mol
Topological Polar Surface Area (TPSA) 372.00 Ų
XlogP -3.00
Atomic LogP (AlogP) -4.12
H-Bond Acceptor 24
H-Bond Donor 13
Rotatable Bonds 11

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (3'S,5'R,7S,9S,13S,16S)-16-[(2R,3S,5R)-3,4-dihydroxy-5-[(2S,3S,5R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-6-(hydroxymethyl)oxan-2-yl]oxy-3'-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5734 57.34%
Caco-2 - 0.8804 88.04%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7299 72.99%
OATP2B1 inhibitior - 0.8739 87.39%
OATP1B1 inhibitior + 0.8689 86.89%
OATP1B3 inhibitior + 0.9419 94.19%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.7603 76.03%
P-glycoprotein inhibitior + 0.7407 74.07%
P-glycoprotein substrate + 0.6251 62.51%
CYP3A4 substrate + 0.7501 75.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8483 84.83%
CYP3A4 inhibition - 0.9265 92.65%
CYP2C9 inhibition - 0.9261 92.61%
CYP2C19 inhibition - 0.9124 91.24%
CYP2D6 inhibition - 0.9583 95.83%
CYP1A2 inhibition - 0.9264 92.64%
CYP2C8 inhibition + 0.6628 66.28%
CYP inhibitory promiscuity - 0.9693 96.93%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6417 64.17%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9053 90.53%
Skin irritation - 0.6168 61.68%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.7454 74.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8027 80.27%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.9422 94.22%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.8138 81.38%
Acute Oral Toxicity (c) I 0.7641 76.41%
Estrogen receptor binding + 0.8521 85.21%
Androgen receptor binding + 0.7399 73.99%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.6471 64.71%
Aromatase binding + 0.6319 63.19%
PPAR gamma + 0.7743 77.43%
Honey bee toxicity - 0.5744 57.44%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.8173 81.73%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.66% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.83% 96.09%
CHEMBL1937 Q92769 Histone deacetylase 2 94.85% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.27% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.71% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.66% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 90.71% 91.24%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.77% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.70% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.26% 96.61%
CHEMBL5255 O00206 Toll-like receptor 4 87.47% 92.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.14% 97.25%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 84.86% 80.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.54% 94.00%
CHEMBL226 P30542 Adenosine A1 receptor 83.41% 95.93%
CHEMBL237 P41145 Kappa opioid receptor 82.95% 98.10%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.94% 89.00%
CHEMBL1914 P06276 Butyrylcholinesterase 82.82% 95.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.14% 96.77%
CHEMBL233 P35372 Mu opioid receptor 81.54% 97.93%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.28% 95.50%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.07% 97.50%
CHEMBL2581 P07339 Cathepsin D 80.50% 98.95%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agave macroacantha

Cross-Links

Top
PubChem 162817620
LOTUS LTS0000991
wikiData Q105036298