18-O-demethylpederin

Details

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Internal ID 1a97dfe9-28b4-4108-acd0-e6c640a92b76
Taxonomy Organic oxygen compounds > Organooxygen compounds > Ethers > Acetals > Ketals
IUPAC Name (2S)-2-hydroxy-N-[(S)-[(2S,4R,6R)-4-hydroxy-6-[(2S)-3-hydroxy-2-methoxypropyl]-5,5-dimethyloxan-2-yl]-methoxymethyl]-2-[(2R,5R,6R)-2-methoxy-5,6-dimethyl-4-methylideneoxan-2-yl]acetamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C24H43NO9/c1-13-11-24(32-8,34-15(3)14(13)2)20(28)21(29)25-22(31-7)17-10-18(27)23(4,5)19(33-17)9-16(12-26)30-6/h14-20,22,26-28H,1,9-12H2,2-8H3,(H,25,29)/t14-,15-,16+,17+,18-,19-,20-,22+,24-/m1/s1
InChI Key RYMNJJUXEZDWPS-FQZCGRDXSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C24H43NO9
Molecular Weight 489.60 g/mol
Exact Mass 489.29378195 g/mol
Topological Polar Surface Area (TPSA) 136.00 Ų
XlogP 0.40
Atomic LogP (AlogP) 0.72
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 10

Synonyms

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CHEMBL4213672
SCHEMBL23918919
HY-N11667
CS-0676337

2D Structure

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2D Structure of 18-O-demethylpederin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4634 46.34%
Caco-2 - 0.7810 78.10%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7244 72.44%
OATP2B1 inhibitior - 0.8565 85.65%
OATP1B1 inhibitior + 0.8632 86.32%
OATP1B3 inhibitior + 0.9234 92.34%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.8030 80.30%
P-glycoprotein inhibitior - 0.5267 52.67%
P-glycoprotein substrate + 0.6569 65.69%
CYP3A4 substrate + 0.7020 70.20%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8701 87.01%
CYP3A4 inhibition - 0.8516 85.16%
CYP2C9 inhibition - 0.8631 86.31%
CYP2C19 inhibition - 0.8919 89.19%
CYP2D6 inhibition - 0.9096 90.96%
CYP1A2 inhibition - 0.8574 85.74%
CYP2C8 inhibition + 0.4738 47.38%
CYP inhibitory promiscuity - 0.8705 87.05%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6403 64.03%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.9411 94.11%
Skin irritation - 0.7693 76.93%
Skin corrosion - 0.9381 93.81%
Ames mutagenesis - 0.5891 58.91%
Human Ether-a-go-go-Related Gene inhibition - 0.4240 42.40%
Micronuclear + 0.6300 63.00%
Hepatotoxicity + 0.5138 51.38%
skin sensitisation - 0.8144 81.44%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity + 0.6563 65.63%
Acute Oral Toxicity (c) III 0.6166 61.66%
Estrogen receptor binding + 0.5853 58.53%
Androgen receptor binding + 0.5593 55.93%
Thyroid receptor binding + 0.5759 57.59%
Glucocorticoid receptor binding + 0.7368 73.68%
Aromatase binding + 0.6733 67.33%
PPAR gamma + 0.5792 57.92%
Honey bee toxicity - 0.6141 61.41%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5750 57.50%
Fish aquatic toxicity + 0.6724 67.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.30% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.18% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.73% 94.45%
CHEMBL340 P08684 Cytochrome P450 3A4 92.41% 91.19%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 91.96% 95.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.90% 97.09%
CHEMBL2094135 Q96BI3 Gamma-secretase 90.72% 98.05%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 90.11% 91.24%
CHEMBL2581 P07339 Cathepsin D 89.86% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 88.89% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.77% 99.17%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.40% 93.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.15% 97.14%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 84.96% 92.88%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 84.87% 98.75%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.67% 95.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.22% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.09% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.02% 95.89%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.67% 96.95%
CHEMBL2413 P32246 C-C chemokine receptor type 1 82.64% 89.50%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.26% 94.33%
CHEMBL299 P17252 Protein kinase C alpha 80.60% 98.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 138319300
LOTUS LTS0275839
wikiData Q105247691