beta-D-Xylopyranoside, (3beta,15alpha,16alpha,23R,24S)-25-(acetyloxy)-16,23:16,24-diepoxy-15-hydroxy-9,19-cyclolanostan-3-yl, 3-acetate

Details

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Internal ID 296743c4-d00d-4c47-8b80-18d8348bbdfd
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name [(2S,3R,4S,5R)-2-[[(1S,2R,3S,4R,7R,9S,12R,14S,17R,18R,19R,21R,22S)-22-(2-acetyloxypropan-2-yl)-2-hydroxy-3,8,8,17,19-pentamethyl-23,24-dioxaheptacyclo[19.2.1.01,18.03,17.04,14.07,12.012,14]tetracosan-9-yl]oxy]-3,5-dihydroxyoxan-4-yl] acetate
SMILES (Canonical) CC1CC2C(OC3(C1C4(CCC56CC57CCC(C(C7CCC6C4(C3O)C)(C)C)OC8C(C(C(CO8)O)OC(=O)C)O)C)O2)C(C)(C)OC(=O)C
SMILES (Isomeric) C[C@@H]1C[C@@H]2[C@H](O[C@]3([C@H]1[C@]4(CC[C@@]56C[C@@]57CC[C@@H](C([C@@H]7CC[C@H]6[C@@]4([C@H]3O)C)(C)C)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)OC(=O)C)O)C)O2)C(C)(C)OC(=O)C
InChI InChI=1S/C39H60O11/c1-19-16-23-30(34(6,7)48-21(3)41)50-39(49-23)29(19)35(8)14-15-38-18-37(38)13-12-26(47-31-27(43)28(46-20(2)40)22(42)17-45-31)33(4,5)24(37)10-11-25(38)36(35,9)32(39)44/h19,22-32,42-44H,10-18H2,1-9H3/t19-,22-,23-,24+,25+,26+,27-,28+,29-,30+,31+,32-,35-,36-,37-,38+,39+/m1/s1
InChI Key RQEFTCPCSKWKPF-SQLYFSCNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C39H60O11
Molecular Weight 704.90 g/mol
Exact Mass 704.41356273 g/mol
Topological Polar Surface Area (TPSA) 150.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 4.26
H-Bond Acceptor 11
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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DTXSID601104718
1208163-64-7
beta-D-Xylopyranoside, (3beta,15alpha,16alpha,23R,24S)-25-(acetyloxy)-16,23:16,24-diepoxy-15-hydroxy-9,19-cyclolanostan-3-yl, 3-acetate

2D Structure

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2D Structure of beta-D-Xylopyranoside, (3beta,15alpha,16alpha,23R,24S)-25-(acetyloxy)-16,23:16,24-diepoxy-15-hydroxy-9,19-cyclolanostan-3-yl, 3-acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8351 83.51%
Caco-2 - 0.8568 85.68%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7444 74.44%
OATP2B1 inhibitior - 0.8645 86.45%
OATP1B1 inhibitior + 0.8323 83.23%
OATP1B3 inhibitior + 0.9671 96.71%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior - 0.5617 56.17%
P-glycoprotein inhibitior + 0.7700 77.00%
P-glycoprotein substrate + 0.6258 62.58%
CYP3A4 substrate + 0.7355 73.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8696 86.96%
CYP3A4 inhibition - 0.8117 81.17%
CYP2C9 inhibition - 0.8135 81.35%
CYP2C19 inhibition - 0.8933 89.33%
CYP2D6 inhibition - 0.9450 94.50%
CYP1A2 inhibition - 0.8933 89.33%
CYP2C8 inhibition + 0.7292 72.92%
CYP inhibitory promiscuity - 0.9542 95.42%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5961 59.61%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9111 91.11%
Skin irritation - 0.6468 64.68%
Skin corrosion - 0.9180 91.80%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6932 69.32%
Micronuclear - 0.7500 75.00%
Hepatotoxicity - 0.6875 68.75%
skin sensitisation - 0.8938 89.38%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.6430 64.30%
Acute Oral Toxicity (c) I 0.4725 47.25%
Estrogen receptor binding + 0.6505 65.05%
Androgen receptor binding + 0.7551 75.51%
Thyroid receptor binding - 0.5534 55.34%
Glucocorticoid receptor binding + 0.6752 67.52%
Aromatase binding + 0.7018 70.18%
PPAR gamma + 0.6948 69.48%
Honey bee toxicity - 0.6200 62.00%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9420 94.20%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.80% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.55% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.46% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 95.23% 96.77%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 93.02% 82.69%
CHEMBL340 P08684 Cytochrome P450 3A4 92.48% 91.19%
CHEMBL2581 P07339 Cathepsin D 91.91% 98.95%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 91.32% 89.34%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.18% 92.94%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 90.81% 96.95%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 90.62% 98.75%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 90.38% 92.88%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.49% 97.14%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 88.27% 95.71%
CHEMBL1914 P06276 Butyrylcholinesterase 87.95% 95.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.83% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.59% 97.09%
CHEMBL2413 P32246 C-C chemokine receptor type 1 87.18% 89.50%
CHEMBL5255 O00206 Toll-like receptor 4 86.84% 92.50%
CHEMBL1902 P62942 FK506-binding protein 1A 86.11% 97.05%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.44% 91.24%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 84.84% 98.99%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.52% 95.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.45% 91.07%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.18% 94.45%
CHEMBL325 Q13547 Histone deacetylase 1 84.14% 95.92%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.78% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.62% 86.33%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 83.33% 100.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.45% 100.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.97% 100.00%
CHEMBL2996 Q05655 Protein kinase C delta 81.91% 97.79%
CHEMBL3837 P07711 Cathepsin L 81.65% 96.61%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 81.31% 91.03%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 80.34% 94.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea cimicifuga

Cross-Links

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PubChem 46184085
LOTUS LTS0218757
wikiData Q105243268