Sek-1005

Details

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Internal ID 170d89a4-3aa5-47b7-8e12-3af778b3064b
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name N-[3-benzyl-7-hydroxy-20-(hydroxymethyl)-4,6-dimethyl-2,5,8,15,19,22-hexaoxo-17-propan-2-yl-18-oxa-1,4,7,13,14,21,27-heptazatricyclo[21.4.0.09,14]heptacosan-16-yl]-2-hydroxy-2-[2-hydroxy-6-methyl-5-(2-methylpropyl)oxan-2-yl]propanamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C45H70N8O13/c1-25(2)22-30-18-19-45(63,66-28(30)6)44(7,62)43(61)49-35-36(26(3)4)65-42(60)31(24-54)48-37(55)32-16-12-20-46-51(32)39(57)34(23-29-14-10-9-11-15-29)50(8)38(56)27(5)53(64)40(58)33-17-13-21-47-52(33)41(35)59/h9-11,14-15,25-28,30-36,46-47,54,62-64H,12-13,16-24H2,1-8H3,(H,48,55)(H,49,61)
InChI Key CQRHYPCUIMZJPK-UHFFFAOYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C45H70N8O13
Molecular Weight 931.10 g/mol
Exact Mass 930.50623432 g/mol
Topological Polar Surface Area (TPSA) 280.00 Ų
XlogP 2.60
Atomic LogP (AlogP) -0.50
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

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N-[3-Benzyl-7-hydroxy-20-(hydroxymethyl)-4,6-dimethyl-2,5,8,15,19,22-hexaoxo-17-propan-2-yl-18-oxa-1,4,7,13,14,21,27-heptazatricyclo[21.4.0.09,14]heptacosan-16-yl]-2-hydroxy-2-[2-hydroxy-6-methyl-5-(2-methylpropyl)oxan-2-yl]propanamide

2D Structure

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2D Structure of Sek-1005

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7597 75.97%
Caco-2 - 0.8629 86.29%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Lysosomes 0.4249 42.49%
OATP2B1 inhibitior - 0.8584 85.84%
OATP1B1 inhibitior + 0.8247 82.47%
OATP1B3 inhibitior + 0.9259 92.59%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8653 86.53%
P-glycoprotein inhibitior + 0.7503 75.03%
P-glycoprotein substrate + 0.8670 86.70%
CYP3A4 substrate + 0.7408 74.08%
CYP2C9 substrate - 0.8015 80.15%
CYP2D6 substrate - 0.8537 85.37%
CYP3A4 inhibition - 0.6781 67.81%
CYP2C9 inhibition - 0.7373 73.73%
CYP2C19 inhibition - 0.7412 74.12%
CYP2D6 inhibition - 0.8695 86.95%
CYP1A2 inhibition - 0.8658 86.58%
CYP2C8 inhibition + 0.7576 75.76%
CYP inhibitory promiscuity - 0.9803 98.03%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.7900 79.00%
Carcinogenicity (trinary) Non-required 0.5048 50.48%
Eye corrosion - 0.9816 98.16%
Eye irritation - 0.9048 90.48%
Skin irritation - 0.7627 76.27%
Skin corrosion - 0.9222 92.22%
Ames mutagenesis - 0.6470 64.70%
Human Ether-a-go-go-Related Gene inhibition - 0.3849 38.49%
Micronuclear + 0.7900 79.00%
Hepatotoxicity + 0.5404 54.04%
skin sensitisation - 0.8301 83.01%
Respiratory toxicity + 0.9111 91.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.5887 58.87%
Acute Oral Toxicity (c) III 0.6033 60.33%
Estrogen receptor binding + 0.8242 82.42%
Androgen receptor binding + 0.7608 76.08%
Thyroid receptor binding + 0.6513 65.13%
Glucocorticoid receptor binding + 0.7093 70.93%
Aromatase binding + 0.5931 59.31%
PPAR gamma + 0.8129 81.29%
Honey bee toxicity - 0.7124 71.24%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.8105 81.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.68% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.83% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.08% 96.09%
CHEMBL4072 P07858 Cathepsin B 97.60% 93.67%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 96.58% 90.93%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.67% 96.61%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.52% 85.14%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 94.37% 97.64%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.88% 91.11%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 93.46% 97.14%
CHEMBL3837 P07711 Cathepsin L 93.26% 96.61%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.68% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.52% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.99% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.42% 95.89%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 89.78% 93.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 88.93% 96.47%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.90% 90.08%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 87.54% 97.33%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.20% 86.33%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 84.93% 94.23%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 84.14% 95.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.11% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.61% 89.00%
CHEMBL3384 Q16512 Protein kinase N1 82.79% 80.71%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 82.61% 95.00%
CHEMBL333 P08253 Matrix metalloproteinase-2 82.24% 96.31%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.05% 91.07%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 81.30% 88.42%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.03% 93.03%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 80.72% 94.62%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 80.24% 96.37%
CHEMBL5028 O14672 ADAM10 80.16% 97.50%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.14% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 9897734
LOTUS LTS0003571
wikiData Q77384872