1,5-dihydroxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

Details

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Internal ID 31359fed-92a6-4724-b5a6-dd716fae2246
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,5-dihydroxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one
SMILES (Canonical) C1=CC(=C2C(=C1)OC3=C(C2=O)C=CC(=C3O)OC4C(C(C(C(O4)CO)O)O)O)O
SMILES (Isomeric) C1=CC(=C2C(=C1)OC3=C(C2=O)C=CC(=C3O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O
InChI InChI=1S/C19H18O10/c20-6-11-14(23)16(25)17(26)19(29-11)28-10-5-4-7-13(22)12-8(21)2-1-3-9(12)27-18(7)15(10)24/h1-5,11,14,16-17,19-21,23-26H,6H2/t11-,14-,16+,17-,19-/m1/s1
InChI Key CTOLSFASROFSCG-FJMCMGCSSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C19H18O10
Molecular Weight 406.30 g/mol
Exact Mass 406.08999677 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP 0.60
Atomic LogP (AlogP) -0.46
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 1,5-dihydroxy-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5923 59.23%
Caco-2 - 0.9394 93.94%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.5362 53.62%
OATP2B1 inhibitior + 0.5948 59.48%
OATP1B1 inhibitior + 0.9009 90.09%
OATP1B3 inhibitior + 0.9389 93.89%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.6432 64.32%
P-glycoprotein inhibitior - 0.8114 81.14%
P-glycoprotein substrate - 0.7502 75.02%
CYP3A4 substrate + 0.5833 58.33%
CYP2C9 substrate - 0.6762 67.62%
CYP2D6 substrate - 0.8575 85.75%
CYP3A4 inhibition - 0.9207 92.07%
CYP2C9 inhibition - 0.9414 94.14%
CYP2C19 inhibition - 0.9119 91.19%
CYP2D6 inhibition - 0.9327 93.27%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition + 0.5378 53.78%
CYP inhibitory promiscuity - 0.8472 84.72%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7090 70.90%
Eye corrosion - 0.9928 99.28%
Eye irritation - 0.8202 82.02%
Skin irritation - 0.7983 79.83%
Skin corrosion - 0.9715 97.15%
Ames mutagenesis + 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6835 68.35%
Micronuclear + 0.6033 60.33%
Hepatotoxicity - 0.5571 55.71%
skin sensitisation - 0.8796 87.96%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7231 72.31%
Acute Oral Toxicity (c) III 0.4513 45.13%
Estrogen receptor binding + 0.6741 67.41%
Androgen receptor binding + 0.5946 59.46%
Thyroid receptor binding + 0.5150 51.50%
Glucocorticoid receptor binding + 0.6979 69.79%
Aromatase binding + 0.6468 64.68%
PPAR gamma + 0.7299 72.99%
Honey bee toxicity - 0.8300 83.00%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6999 69.99%
Fish aquatic toxicity + 0.7790 77.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.37% 91.11%
CHEMBL220 P22303 Acetylcholinesterase 96.29% 94.45%
CHEMBL1951 P21397 Monoamine oxidase A 95.38% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.16% 89.00%
CHEMBL2581 P07339 Cathepsin D 94.21% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.12% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.77% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.34% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 87.08% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.73% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.15% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.52% 94.45%
CHEMBL1255126 O15151 Protein Mdm4 85.01% 90.20%
CHEMBL3194 P02766 Transthyretin 84.45% 90.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.36% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.54% 96.21%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.98% 99.17%
CHEMBL1937 Q92769 Histone deacetylase 2 81.77% 94.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides
Hypericum henryi

Cross-Links

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PubChem 5316845
NPASS NPC178751
LOTUS LTS0031055
wikiData Q104969956