1,3-dihydroxy-9H-xanthen-9-one

Details

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Internal ID 85952f5d-2742-40f6-a588-fc671bf44008
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,3-dihydroxyxanthen-9-one
SMILES (Canonical) C1=CC=C2C(=C1)C(=O)C3=C(C=C(C=C3O2)O)O
SMILES (Isomeric) C1=CC=C2C(=C1)C(=O)C3=C(C=C(C=C3O2)O)O
InChI InChI=1S/C13H8O4/c14-7-5-9(15)12-11(6-7)17-10-4-2-1-3-8(10)13(12)16/h1-6,14-15H
InChI Key GTHOERCJZSJGHB-UHFFFAOYSA-N
Popularity 31 references in papers

Physical and Chemical Properties

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Molecular Formula C13H8O4
Molecular Weight 228.20 g/mol
Exact Mass 228.04225873 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.36
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 0

Synonyms

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3875-68-1
1,3-Dihydroxyxanthone
1,3-dihydroxyxanthen-9-one
1,3-Dihydroxy-xanthone
MFCD00800670
9H-Xanthen-9-one,1,3-dihydroxy-
9H-Xanthen-9-one, 1,3-dihydroxy-
6,8-Dihydroxyxanthone
CHEMBL388525
SCHEMBL2314333
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1,3-dihydroxy-9H-xanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9567 95.67%
Caco-2 + 0.6000 60.00%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.5690 56.90%
OATP2B1 inhibitior - 0.7040 70.40%
OATP1B1 inhibitior + 0.8562 85.62%
OATP1B3 inhibitior + 0.9708 97.08%
MATE1 inhibitior - 0.5200 52.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.8808 88.08%
P-glycoprotein inhibitior - 0.8965 89.65%
P-glycoprotein substrate - 0.9119 91.19%
CYP3A4 substrate - 0.5072 50.72%
CYP2C9 substrate - 0.6265 62.65%
CYP2D6 substrate - 0.8495 84.95%
CYP3A4 inhibition + 0.9238 92.38%
CYP2C9 inhibition + 0.5096 50.96%
CYP2C19 inhibition + 0.5823 58.23%
CYP2D6 inhibition - 0.8897 88.97%
CYP1A2 inhibition + 0.9554 95.54%
CYP2C8 inhibition + 0.5110 51.10%
CYP inhibitory promiscuity + 0.5734 57.34%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6071 60.71%
Eye corrosion - 0.9778 97.78%
Eye irritation + 0.9727 97.27%
Skin irritation + 0.6231 62.31%
Skin corrosion - 0.9803 98.03%
Ames mutagenesis + 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8548 85.48%
Micronuclear + 0.8200 82.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.8351 83.51%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.5889 58.89%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.5635 56.35%
Acute Oral Toxicity (c) III 0.7422 74.22%
Estrogen receptor binding + 0.8612 86.12%
Androgen receptor binding + 0.8625 86.25%
Thyroid receptor binding + 0.7499 74.99%
Glucocorticoid receptor binding + 0.9376 93.76%
Aromatase binding + 0.8625 86.25%
PPAR gamma + 0.8854 88.54%
Honey bee toxicity - 0.9190 91.90%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.7801 78.01%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.77% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.70% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.50% 89.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 92.49% 93.99%
CHEMBL2581 P07339 Cathepsin D 91.37% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.88% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 88.77% 94.73%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 87.47% 93.65%
CHEMBL1929 P47989 Xanthine dehydrogenase 87.46% 96.12%
CHEMBL2535 P11166 Glucose transporter 82.65% 98.75%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.52% 94.00%
CHEMBL1951 P21397 Monoamine oxidase A 82.46% 91.49%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.32% 86.33%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 80.83% 88.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhachidosorus mesosorus

Cross-Links

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PubChem 5488193
LOTUS LTS0092145
wikiData Q83064626