1,3-dihydroxy-4-(3-hydroxy-1,2-dimethoxy-9H-xanthen-9-yl)-2-methylxanthen-9-one

Details

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Internal ID c12fc21c-9792-4da4-b421-6b11ffb96cb1
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,3-dihydroxy-4-(3-hydroxy-1,2-dimethoxy-9H-xanthen-9-yl)-2-methylxanthen-9-one
SMILES (Canonical) CC1=C(C2=C(C(=C1O)C3C4=CC=CC=C4OC5=C3C(=C(C(=C5)O)OC)OC)OC6=CC=CC=C6C2=O)O
SMILES (Isomeric) CC1=C(C2=C(C(=C1O)C3C4=CC=CC=C4OC5=C3C(=C(C(=C5)O)OC)OC)OC6=CC=CC=C6C2=O)O
InChI InChI=1S/C29H22O8/c1-13-24(31)22(28-23(25(13)32)26(33)15-9-5-7-11-18(15)37-28)20-14-8-4-6-10-17(14)36-19-12-16(30)27(34-2)29(35-3)21(19)20/h4-12,20,30-32H,1-3H3
InChI Key WCEMBWGZHJKCRU-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C29H22O8
Molecular Weight 498.50 g/mol
Exact Mass 498.13146766 g/mol
Topological Polar Surface Area (TPSA) 115.00 Ų
XlogP 5.70
Atomic LogP (AlogP) 5.67
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 1,3-dihydroxy-4-(3-hydroxy-1,2-dimethoxy-9H-xanthen-9-yl)-2-methylxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9294 92.94%
Caco-2 - 0.5623 56.23%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.6634 66.34%
OATP2B1 inhibitior - 0.7121 71.21%
OATP1B1 inhibitior + 0.8366 83.66%
OATP1B3 inhibitior + 0.8683 86.83%
MATE1 inhibitior - 0.6000 60.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.8543 85.43%
P-glycoprotein inhibitior + 0.8801 88.01%
P-glycoprotein substrate - 0.5493 54.93%
CYP3A4 substrate + 0.6703 67.03%
CYP2C9 substrate - 0.6020 60.20%
CYP2D6 substrate - 0.8386 83.86%
CYP3A4 inhibition + 0.6046 60.46%
CYP2C9 inhibition - 0.8044 80.44%
CYP2C19 inhibition + 0.5525 55.25%
CYP2D6 inhibition - 0.7574 75.74%
CYP1A2 inhibition + 0.6454 64.54%
CYP2C8 inhibition + 0.7201 72.01%
CYP inhibitory promiscuity + 0.7634 76.34%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5632 56.32%
Eye corrosion - 0.9835 98.35%
Eye irritation - 0.8241 82.41%
Skin irritation - 0.7209 72.09%
Skin corrosion - 0.9578 95.78%
Ames mutagenesis + 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7120 71.20%
Micronuclear + 0.8700 87.00%
Hepatotoxicity - 0.5625 56.25%
skin sensitisation - 0.9248 92.48%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity - 0.9703 97.03%
Acute Oral Toxicity (c) III 0.5329 53.29%
Estrogen receptor binding + 0.8345 83.45%
Androgen receptor binding + 0.8063 80.63%
Thyroid receptor binding + 0.6088 60.88%
Glucocorticoid receptor binding + 0.8499 84.99%
Aromatase binding + 0.5491 54.91%
PPAR gamma + 0.7518 75.18%
Honey bee toxicity - 0.7767 77.67%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.8434 84.34%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.77% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.67% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.34% 89.00%
CHEMBL2581 P07339 Cathepsin D 95.18% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.10% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.88% 99.23%
CHEMBL2535 P11166 Glucose transporter 90.23% 98.75%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 89.00% 93.65%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.49% 85.14%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 85.20% 99.15%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.00% 92.62%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.69% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.46% 94.45%
CHEMBL3192 Q9BY41 Histone deacetylase 8 84.32% 93.99%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.33% 86.33%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.28% 95.50%
CHEMBL3401 O75469 Pregnane X receptor 80.31% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhinotropis nitida

Cross-Links

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PubChem 163192333
LOTUS LTS0257859
wikiData Q105301380