(2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4-dihydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methylsulfanyl]butanoic acid

Details

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Internal ID 7d424e2b-7c4f-4925-91f5-3cd06ce034f7
Taxonomy Nucleosides, nucleotides, and analogues > 5-deoxyribonucleosides > 5-deoxy-5-thionucleosides
IUPAC Name (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4-dihydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methylsulfanyl]butanoic acid
SMILES (Canonical) C1=NC(=O)C2=C(N1)N(C=N2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O
SMILES (Isomeric) C1=NC(=O)C2=C(N1)N(C=N2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O
InChI InChI=1S/C14H19N5O6S/c15-6(14(23)24)1-2-26-3-7-9(20)10(21)13(25-7)19-5-18-8-11(19)16-4-17-12(8)22/h4-7,9-10,13,20-21H,1-3,15H2,(H,23,24)(H,16,17,22)/t6-,7+,9+,10+,13+/m0/s1
InChI Key VNPWVMVYUSNFAW-WFMPWKQPSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C14H19N5O6S
Molecular Weight 385.40 g/mol
Exact Mass 385.10560452 g/mol
Topological Polar Surface Area (TPSA) 198.00 Ų
XlogP -4.60
Atomic LogP (AlogP) -1.73
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4-dihydroxy-5-(6-oxo-3H-purin-9-yl)oxolan-2-yl]methylsulfanyl]butanoic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7310 73.10%
Caco-2 - 0.8975 89.75%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Nucleus 0.5250 52.50%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9204 92.04%
OATP1B3 inhibitior + 0.9397 93.97%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8416 84.16%
BSEP inhibitior - 0.7148 71.48%
P-glycoprotein inhibitior - 0.7211 72.11%
P-glycoprotein substrate - 0.6797 67.97%
CYP3A4 substrate + 0.5382 53.82%
CYP2C9 substrate - 0.7955 79.55%
CYP2D6 substrate - 0.8436 84.36%
CYP3A4 inhibition - 0.8958 89.58%
CYP2C9 inhibition - 0.9142 91.42%
CYP2C19 inhibition - 0.8912 89.12%
CYP2D6 inhibition - 0.9039 90.39%
CYP1A2 inhibition - 0.8871 88.71%
CYP2C8 inhibition - 0.7966 79.66%
CYP inhibitory promiscuity - 0.9451 94.51%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6028 60.28%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9790 97.90%
Skin irritation - 0.7691 76.91%
Skin corrosion - 0.9324 93.24%
Ames mutagenesis + 0.5772 57.72%
Human Ether-a-go-go-Related Gene inhibition - 0.7938 79.38%
Micronuclear + 0.9300 93.00%
Hepatotoxicity + 0.5085 50.85%
skin sensitisation - 0.8747 87.47%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.9555 95.55%
Acute Oral Toxicity (c) III 0.6060 60.60%
Estrogen receptor binding + 0.6618 66.18%
Androgen receptor binding - 0.6224 62.24%
Thyroid receptor binding + 0.5836 58.36%
Glucocorticoid receptor binding - 0.5842 58.42%
Aromatase binding + 0.5906 59.06%
PPAR gamma + 0.6403 64.03%
Honey bee toxicity - 0.8518 85.18%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity - 0.5815 58.15%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.18% 96.09%
CHEMBL2581 P07339 Cathepsin D 92.58% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 91.18% 95.93%
CHEMBL2850 P49840 Glycogen synthase kinase-3 alpha 88.57% 88.84%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.36% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.31% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 85.44% 91.11%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 85.42% 90.71%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 85.35% 95.48%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.76% 94.45%
CHEMBL4040 P28482 MAP kinase ERK2 84.58% 83.82%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 84.07% 100.00%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 83.77% 96.67%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.36% 89.00%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 82.36% 98.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.08% 97.09%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 81.99% 92.29%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.99% 99.17%
CHEMBL1795117 Q8TEK3 Histone-lysine N-methyltransferase, H3 lysine-79 specific 81.52% 93.56%
CHEMBL3401 O75469 Pregnane X receptor 81.05% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.89% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.41% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 440011
LOTUS LTS0160697
wikiData Q27102172