10-O-succinoylgeniposide

Details

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Internal ID c8658f2c-1727-402e-bb67-0f45542cd263
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name 4-[[(1S,4aS,7aS)-4-methoxycarbonyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-7-yl]methoxy]-4-oxobutanoic acid
SMILES (Canonical) COC(=O)C1=COC(C2C1CC=C2COC(=O)CCC(=O)O)OC3C(C(C(C(O3)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@H]2[C@@H]1CC=C2COC(=O)CCC(=O)O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O
InChI InChI=1S/C21H28O13/c1-30-19(29)11-8-32-20(34-21-18(28)17(27)16(26)12(6-22)33-21)15-9(2-3-10(11)15)7-31-14(25)5-4-13(23)24/h2,8,10,12,15-18,20-22,26-28H,3-7H2,1H3,(H,23,24)/t10-,12-,15-,16-,17+,18-,20+,21+/m1/s1
InChI Key HXIKOBSBFWQXOF-NLIZERCJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H28O13
Molecular Weight 488.40 g/mol
Exact Mass 488.15299094 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -1.81
H-Bond Acceptor 12
H-Bond Donor 5
Rotatable Bonds 9

Synonyms

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CHEMBL1077845
(1S)-1alpha-(beta-D-Glucopyranosyloxy)-7-(4-hydroxy-4-oxobutanoyloxymethyl)-1,4aalpha,5,7aalpha-tetrahydrocyclopenta[c]pyran-4-carboxylic acid methyl ester

2D Structure

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2D Structure of 10-O-succinoylgeniposide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5343 53.43%
Caco-2 - 0.8774 87.74%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7922 79.22%
OATP2B1 inhibitior - 0.8635 86.35%
OATP1B1 inhibitior + 0.7622 76.22%
OATP1B3 inhibitior + 0.9626 96.26%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7534 75.34%
BSEP inhibitior - 0.7552 75.52%
P-glycoprotein inhibitior - 0.7049 70.49%
P-glycoprotein substrate - 0.6939 69.39%
CYP3A4 substrate + 0.6472 64.72%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8771 87.71%
CYP3A4 inhibition - 0.9587 95.87%
CYP2C9 inhibition - 0.9357 93.57%
CYP2C19 inhibition - 0.8697 86.97%
CYP2D6 inhibition - 0.8987 89.87%
CYP1A2 inhibition - 0.8464 84.64%
CYP2C8 inhibition + 0.5139 51.39%
CYP inhibitory promiscuity - 0.9502 95.02%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6761 67.61%
Eye corrosion - 0.9869 98.69%
Eye irritation - 0.9385 93.85%
Skin irritation - 0.7747 77.47%
Skin corrosion - 0.9548 95.48%
Ames mutagenesis - 0.7137 71.37%
Human Ether-a-go-go-Related Gene inhibition + 0.6708 67.08%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.8960 89.60%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity + 0.6327 63.27%
Acute Oral Toxicity (c) III 0.4948 49.48%
Estrogen receptor binding + 0.7046 70.46%
Androgen receptor binding + 0.5873 58.73%
Thyroid receptor binding - 0.6304 63.04%
Glucocorticoid receptor binding + 0.5669 56.69%
Aromatase binding + 0.5450 54.50%
PPAR gamma + 0.5386 53.86%
Honey bee toxicity - 0.8002 80.02%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7900 79.00%
Fish aquatic toxicity - 0.3784 37.84%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.16% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.66% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.42% 99.17%
CHEMBL4040 P28482 MAP kinase ERK2 91.42% 83.82%
CHEMBL221 P23219 Cyclooxygenase-1 90.00% 90.17%
CHEMBL340 P08684 Cytochrome P450 3A4 88.34% 91.19%
CHEMBL5255 O00206 Toll-like receptor 4 87.82% 92.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.65% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 87.00% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.93% 86.33%
CHEMBL2581 P07339 Cathepsin D 85.25% 98.95%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.66% 96.00%
CHEMBL5028 O14672 ADAM10 80.03% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides

Cross-Links

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PubChem 44255239
NPASS NPC42294
LOTUS LTS0026009
wikiData Q105035018