10-Deoxymethymycin

Details

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Internal ID bbd3ef8c-0dc4-461a-9774-6e7324354b48
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (3R,4S,5S,7R,9E,11R,12R)-4-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-12-ethyl-3,5,7,11-tetramethyl-1-oxacyclododec-9-ene-2,8-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H43NO6/c1-9-21-14(2)10-11-20(27)15(3)12-16(4)23(18(6)24(29)31-21)32-25-22(28)19(26(7)8)13-17(5)30-25/h10-11,14-19,21-23,25,28H,9,12-13H2,1-8H3/b11-10+/t14-,15-,16+,17-,18-,19+,21-,22-,23+,25+/m1/s1
InChI Key DZGHWPQKGWXOHD-NHLONWFASA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C25H43NO6
Molecular Weight 453.60 g/mol
Exact Mass 453.30903809 g/mol
Topological Polar Surface Area (TPSA) 85.30 Ų
XlogP 3.90
Atomic LogP (AlogP) 3.19
H-Bond Acceptor 7
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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Antibiotic YC 17
YC-17
11091-33-1
CHEBI:29706
(3R,4S,5S,7R,9E,11R,12R)-4-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-12-ethyl-3,5,7,11-tetramethyl-1-oxacyclododec-9-ene-2,8-dione
(3R,4S,5S,7R,9E,11R,12R)-4-((2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl)oxy-12-ethyl-3,5,7,11-tetramethyl-1-oxacyclododec-9-ene-2,8-dione
RefChem:1057217
36826-66-1
CHEMBL326421
orb3024345
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 10-Deoxymethymycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8963 89.63%
Caco-2 - 0.6526 65.26%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.4059 40.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8942 89.42%
OATP1B3 inhibitior + 0.9194 91.94%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.6101 61.01%
P-glycoprotein inhibitior - 0.4517 45.17%
P-glycoprotein substrate + 0.5702 57.02%
CYP3A4 substrate + 0.6565 65.65%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8592 85.92%
CYP3A4 inhibition - 0.6636 66.36%
CYP2C9 inhibition - 0.9035 90.35%
CYP2C19 inhibition - 0.8714 87.14%
CYP2D6 inhibition - 0.9273 92.73%
CYP1A2 inhibition - 0.8663 86.63%
CYP2C8 inhibition - 0.9070 90.70%
CYP inhibitory promiscuity - 0.9585 95.85%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5305 53.05%
Eye corrosion - 0.9845 98.45%
Eye irritation - 0.9391 93.91%
Skin irritation - 0.7865 78.65%
Skin corrosion - 0.9247 92.47%
Ames mutagenesis - 0.6154 61.54%
Human Ether-a-go-go-Related Gene inhibition - 0.5377 53.77%
Micronuclear - 0.5400 54.00%
Hepatotoxicity + 0.8375 83.75%
skin sensitisation - 0.8935 89.35%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6718 67.18%
Acute Oral Toxicity (c) III 0.7105 71.05%
Estrogen receptor binding + 0.7468 74.68%
Androgen receptor binding - 0.6005 60.05%
Thyroid receptor binding - 0.4935 49.35%
Glucocorticoid receptor binding - 0.5328 53.28%
Aromatase binding - 0.5599 55.99%
PPAR gamma + 0.6089 60.89%
Honey bee toxicity - 0.6451 64.51%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity - 0.3990 39.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 96.92% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.45% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.26% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.64% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.81% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.48% 95.56%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 86.40% 96.77%
CHEMBL4208 P20618 Proteasome component C5 84.48% 90.00%
CHEMBL3401 O75469 Pregnane X receptor 84.34% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.54% 94.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.93% 97.25%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.93% 92.94%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.51% 96.21%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.15% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 5282032
LOTUS LTS0177570
wikiData Q27110232